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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
726.0
nTPM
FANTOM5:
865.6
Scaled Tags Per Million
Pig:
556.0
nTPM
Allen mouse:
19.0
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
726.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 629.4
2301
Female, age 85, both hemispheres
661.9
2090
Male, age 80, both hemispheres
637.4
1984
Male, age 76, both hemispheres
627.0
2188
Female, age 91, both hemispheres
591.1
Dorsal cochlear nucleus nTPM: 656.6
2802
Male, age 74, right hemisphere
725.0
2058
Male, age 76, both hemispheres
669.8
2378
Male, age 80, both hemispheres
667.2
2187
Female, age 91, both hemispheres
663.5
2370
Male, age 61, both hemispheres
557.4
Dorsal tegmental nucleus nTPM: 646.6
2083
Male, age 80, both hemispheres
684.4
2326
Male, age 74, both hemispheres
684.2
2358
Male, age 61, both hemispheres
639.5
1936
Male, age 76, left hemisphere
578.1
Dorsolateral tegmental area nTPM: 623.2
2337
Male, age 61, both hemispheres
724.7
2654
Male, age 80, both hemispheres
663.3
2141
Male, age 76, both hemispheres
605.9
2751
Female, age 85, both hemispheres
579.2
2360
Male, age 74, both hemispheres
543.0
Kolliker-Fuse nucleus nTPM: 608.1
2163
Male, age 80, both hemispheres
643.7
2793
Female, age 91, left hemisphere
632.1
2315
Male, age 76, right hemisphere
548.5
Lateral lemniscal nuclei nTPM: 673.9
2169
Male, age 76, both hemispheres
770.5
2746
Female, age 85, left hemisphere
702.3
2453
Male, age 74, right hemisphere
662.5
2320
Female, age 91, left hemisphere
653.8
2036
Male, age 80, both hemispheres
580.4
Lateral parabrachial nucleus nTPM: 613.6
2139
Female, age 85, right hemisphere
741.3
2013
Male, age 80, both hemispheres
634.2
2790
Male, age 61, both hemispheres
555.2
2792
Male, age 76, both hemispheres
523.7
Lateral vestibular nucleus nTPM: 679.2
2311
Male, age 80, both hemispheres
709.8
2184
Male, age 76, both hemispheres
648.5
Locus coeruleus nTPM: 606.2
2123
Female, age 91, both hemispheres
677.2
2162
Male, age 80, both hemispheres
660.9
2720
Male, age 74, both hemispheres
624.6
2317
Female, age 72, unknown
609.3
1980
Male, age 76, both hemispheres
599.4
2014
Male, age 55, unknown
596.7
2788
Male, age 74, unknown
475.0
Medial parabrachial nucleus nTPM: 633.5
2170
Female, age 91, both hemispheres
691.0
2463
Female, age 85, right hemisphere
638.4
2786
Male, age 76, both hemispheres
616.3
2156
Male, age 61, both hemispheres
611.2
2854
Male, age 80, both hemispheres
610.5
Medial periolivary nuclei nTPM: 674.0
2063
Male, age 76, both hemispheres
848.8
2171
Female, age 85, both hemispheres
765.3
2081
Male, age 80, both hemispheres
608.9
2458
Female, age 91, both hemispheres
582.6
2791
Male, age 74, right hemisphere
564.6
Motor facial nucleus nTPM: 682.8
2062
Male, age 76, both hemispheres
869.9
2795
Female, age 91, both hemispheres
710.1
2365
Male, age 74, right hemisphere
647.1
2327
Male, age 80, both hemispheres
628.4
2126
Male, age 61, both hemispheres
623.4
2697
Female, age 85, both hemispheres
617.8
Motor trigeminal nucleus nTPM: 630.2
2560
Male, age 74, both hemispheres
674.9
2079
Male, age 80, both hemispheres
630.7
2335
Male, age 61, both hemispheres
628.1
2321
Female, age 91, both hemispheres
609.1
2309
Male, age 76, both hemispheres
608.3
Nuclei of the trapezoid body nTPM: 726.0
1983
Male, age 76, both hemispheres
850.1
2735
Female, age 85, both hemispheres
805.1
2159
Male, age 61, both hemispheres
697.1
2368
Female, age 91, both hemispheres
656.2
2166
Male, age 80, both hemispheres
621.3
Nucleus raphe magnus nTPM: 710.8
2172
Female, age 85, both hemispheres
818.3
2160
Male, age 61, both hemispheres
785.4
2051
Male, age 76, both hemispheres
713.5
2455
Male, age 74, both hemispheres
682.8
2328
Male, age 80, both hemispheres
657.2
2459
Female, age 91, both hemispheres
607.5
Paramedian reticular nucleus nTPM: 584.0
2057
Male, age 80, both hemispheres
646.2
2050
Female, age 85, both hemispheres
624.8
2313
Male, age 61, both hemispheres
577.4
2052
Male, age 76, both hemispheres
487.6
Pedunculopontine tegmental nucleus nTPM: 604.6
2334
Male, age 80, both hemispheres
627.0
2338
Male, age 61, both hemispheres
621.9
1921
Female, age 85, both hemispheres
564.9
Pontine nuclei nTPM: 719.3
2787
Female, age 85, both hemispheres
946.3
1968
Male, age 76, left hemisphere
834.0
1863
Male, age 55, unknown
768.9
2727
Male, age 61, right hemisphere
732.1
2109
Female, age 72, unknown
679.1
2115
Male, age 80, left hemisphere
632.0
2319
Female, age 91, both hemispheres
619.9
2454
Male, age 74, left hemisphere
542.3
Pontine raphe nucleus nTPM: 651.8
2122
Female, age 85, midline
718.0
2853
Male, age 76, midline
585.6
Posteroventral cochlear nucleus nTPM: 603.2
2752
Female, age 85, both hemispheres
697.5
2070
Male, age 76, both hemispheres
616.0
2371
Male, age 61, both hemispheres
596.0
2341
Male, age 80, both hemispheres
568.2
2135
Female, age 91, both hemispheres
538.2
Principal sensory trigeminal nucleus nTPM: 664.9
2158
Male, age 61, both hemispheres
794.6
2324
Male, age 76, both hemispheres
650.1
2008
Male, age 80, left hemisphere
622.3
2367
Female, age 91, left hemisphere
592.6
Reticular pontine nucleus, caudal nTPM: 657.0
2092
Male, age 76, both hemispheres
715.9
2332
Male, age 80, right hemisphere
665.3
2457
Female, age 91, both hemispheres
628.0
2559
Male, age 74, both hemispheres
618.6
Reticular pontine nucleus, oral nTPM: 611.9
2167
Male, age 76, both hemispheres
637.3
2012
Female, age 85, both hemispheres
630.0
2361
Male, age 74, both hemispheres
613.4
2366
Female, age 91, both hemispheres
590.9
1939
Male, age 80, both hemispheres
587.8
Reticulotegmental nucleus nTPM: 643.2
2452
Male, age 74, both hemispheres
691.6
2325
Male, age 76, both hemispheres
638.7
2333
Male, age 80, both hemispheres
624.3
2322
Female, age 91, both hemispheres
618.3
Spinal trigeminal nucleus, oral nTPM: 620.7
2164
Male, age 80, both hemispheres
648.5
1978
Male, age 76, both hemispheres
628.5
2737
Female, age 85, both hemispheres
585.1
Subcoeruleus area nTPM: 649.7
2451
Male, age 74, both hemispheres
739.3
2089
Male, age 76, left hemisphere
697.7
2323
Female, age 91, left hemisphere
645.9
1958
Male, age 80, both hemispheres
598.8
2369
Female, age 85, left hemisphere
566.8
Superior olive nTPM: 648.9
2020
Male, age 76, both hemispheres
714.3
1875
Female, age 85, both hemispheres
654.6
2561
Female, age 91, both hemispheres
653.7
2329
Male, age 80, right hemisphere
630.4
2364
Male, age 74, right hemisphere
591.6
Ventral periolivary nuclei nTPM: 693.9
2130
Female, age 85, both hemispheres
805.5
2165
Male, age 80, both hemispheres
685.0
2023
Male, age 76, both hemispheres
665.5
2794
Female, age 91, left hemisphere
619.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 640.9
2161
Male, age 80, both hemispheres
667.0
2449
Male, age 74, both hemispheres
665.6
1959
Male, age 76, both hemispheres
662.6
2359
Male, age 61, both hemispheres
618.9
2456
Female, age 91, both hemispheres
618.3
2840
Female, age 85, both hemispheres
612.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
556.0
Pig sample
Sample description
nTPM
Pons nTPM: 556.0
Samples: 4
Max nTPM: 649.4
Min nTPM: 449.6
Sample A
Female
649.4
Sample B
Female
449.6
Sample C
Male
545.3
Sample D
Male
579.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.