We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
591.2
nTPM
HPA Brain:
725.9
nTPM
GTEx:
591.2
nTPM
FANTOM5:
647.6
Scaled Tags Per Million
Pig:
629.6
nTPM
Mouse:
591.0
nTPM
Allen mouse:
22.9
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
725.9
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 656.3
2586
Male, age 75, left hemisphere
850.3
2828
Female, age 72, unknown
704.0
2666
Male, age 74, left hemisphere
703.6
1827
Male, age 72, unknown
642.3
2219
Male, age 76, both hemispheres
630.1
2411
Female, age 72, unknown
623.3
2019
Male, age 18, unknown
614.1
1870
Female, age 42, unknown
612.4
1833
Male, age 53, unknown
602.3
1830
Male, age 51, unknown
580.8
Dorsal raphe nucleus nTPM: 608.3
2016
Female, age 72, unknown
620.1
2750
Male, age 76, both hemispheres
615.2
2298
Female, age 72, unknown
606.1
1828
Male, age 53, unknown
601.9
2047
Male, age 72, unknown
597.9
Inferior colliculus nTPM: 615.6
1848
Female, age 42, unknown
665.1
2849
Male, age 72, unknown
608.6
1890
Male, age 53, unknown
605.7
2097
Female, age 72, unknown
582.9
Median raphe nucleus nTPM: 564.7
2220
Male, age 76, midline
564.7
Periaquaductal grey, anterior nTPM: 725.9
2502
Female, age 75, unknown
809.3
1947
Male, age 18, unknown
692.1
1795
Male, age 51, unknown
676.1
Periaquaductal grey, dorsal nTPM: 542.5
1840
Male, age 53, unknown
615.5
2464
Female, age 72, unknown
572.4
1831
Male, age 72, unknown
533.1
2850
Male, age 76, both hemispheres
449.3
Periaquaductal grey, lateral nTPM: 541.4
2272
Male, age 74, both hemispheres
586.5
2053
Male, age 18, unknown
584.3
2140
Male, age 76, both hemispheres
453.4
Pretectal area nTPM: 600.5
1816
Male, age 51, unknown
681.2
2007
Male, age 72, unknown
667.0
1817
Female, age 42, unknown
665.0
1944
Female, age 72, unknown
621.8
1815
Male, age 53, unknown
606.8
2407
Male, age 75, both hemispheres
592.7
2825
Male, age 18, unknown
592.4
2667
Female, age 75, unknown
587.9
2224
Female, age 72, unknown
543.4
2273
Male, age 74, both hemispheres
534.5
2316
Male, age 76, right hemisphere
512.6
Red nucleus nTPM: 645.4
2584
Male, age 75, left hemisphere
751.4
2503
Female, age 72, unknown
716.7
2588
Male, age 74, left hemisphere
663.6
2769
Male, age 72, unknown
662.2
2227
Male, age 72, unknown
659.0
1821
Female, age 72, unknown
653.6
1865
Male, age 51, unknown
651.1
2785
Male, age 18, unknown
635.5
1904
Male, age 53, unknown
634.2
1954
Female, age 42, unknown
606.5
2725
Female, age 75, unknown
565.2
2823
Male, age 76, right hemisphere
545.8
Substantia nigra nTPM: 701.5
1916
Female, age 42, unknown
875.0
2665
Male, age 74, both hemispheres
782.3
1851
Male, age 51, unknown
770.9
2590
Female, age 75, unknown
694.4
2241
Male, age 72, unknown
689.5
1941
Male, age 53, unknown
683.1
2583
Male, age 75, right hemisphere
676.7
2699
Male, age 18, unknown
669.9
1889
Female, age 72, unknown
627.3
2409
Female, age 72, unknown
545.8
Superior colliculus nTPM: 647.2
2664
Male, age 75, both hemispheres
768.0
1796
Male, age 53, unknown
699.8
2261
Male, age 18, unknown
699.2
2668
Female, age 75, unknown
668.6
2087
Female, age 72, unknown
647.1
2587
Male, age 74, left hemisphere
643.0
1839
Male, age 51, unknown
616.8
1913
Female, age 42, unknown
598.8
1995
Male, age 72, unknown
583.5
1895
Male, age 76, right hemisphere
546.8
Ventral tegmental area nTPM: 660.6
2410
Female, age 72, unknown
710.5
1915
Female, age 42, unknown
687.0
2223
Female, age 72, unknown
660.5
2218
Male, age 76, both hemispheres
654.5
1942
Male, age 51, unknown
649.0
2021
Male, age 53, unknown
602.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
591.2
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 591.2
Samples: 139
Max nTPM: 1234.0
Min nTPM: 276.7
Std nTPM: 130.7
Median nTPM: 585.9
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
1234.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
1044.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
951.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
886.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
840.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
827.5
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
815.1
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
796.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
769.7
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
757.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
752.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
751.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
745.8
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
735.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
713.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
712.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
709.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
700.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
697.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
697.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
696.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
696.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
695.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
691.1
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
689.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
685.9
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
680.5
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
678.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
676.8
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
669.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
667.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
664.9
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
663.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
657.5
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
656.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
655.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
649.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
647.3
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
646.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
646.2
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
644.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
638.1
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
635.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
633.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
631.6
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
630.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
629.3
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
627.9
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
624.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
622.2
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
620.9
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
620.3
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
618.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
616.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
609.7
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
605.5
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
604.4
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
603.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
601.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
600.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
599.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
599.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
598.1
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
596.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
595.0
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
590.2
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
588.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
588.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
588.0
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
585.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
583.7
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
582.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
581.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
576.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
573.6
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
573.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
571.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
570.2
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
569.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
568.9
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
568.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
564.9
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
562.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
561.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
560.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
559.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
554.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
553.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
550.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
550.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
548.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
547.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
547.0
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
544.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
539.4
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
536.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
532.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
531.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
530.7
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
523.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
523.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
521.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
515.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
515.0
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
509.9
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
508.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
507.2
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
498.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
493.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
493.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
492.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
491.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
490.1
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
482.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
482.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
481.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
481.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
474.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
465.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
458.6
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
456.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
448.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
447.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
443.5
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
434.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
428.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
426.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
424.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
422.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
416.5
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
416.3
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
415.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
408.1
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
406.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
367.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
360.4
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
356.4
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
318.6
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
276.7
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
591.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 591.0
Samples: 4
Max nTPM: 664.1
Min nTPM: 551.3
Sample A
Male
664.1
Sample B
Male
551.3
Sample C
Female
555.9
Sample D
Female
592.8
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.