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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
736.5
nTPM
HPA Brain:
707.5
nTPM
GTEx:
736.5
nTPM
FANTOM5:
643.6
Scaled Tags Per Million
Pig:
461.3
nTPM
Mouse:
701.0
nTPM
Allen mouse:
24.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
707.5
Sample id
Sample description
nTPM
Amygdala nTPM: 655.4
2695
Female, age 67, right hemisphere
753.6
2514
Male, age 75, right hemisphere
664.5
2814
Male, age 76, right hemisphere
657.5
2517
Female, age 94, left hemisphere
605.1
1987
Female, age 91, left hemisphere
596.3
Basal amygdala nTPM: 633.5
2827
Female, age 67, right hemisphere
710.2
2609
Male, age 75, right hemisphere
672.3
2110
Male, age 80, left hemisphere
637.8
2243
Female, age 91, right hemisphere
636.2
2685
Female, age 94, left hemisphere
599.1
1955
Male, age 76, both hemispheres
545.3
Central amygdala nTPM: 680.0
2826
Female, age 94, left hemisphere
874.5
2515
Male, age 75, right hemisphere
740.0
2239
Male, age 80, left hemisphere
652.7
1905
Male, age 76, both hemispheres
607.1
2701
Female, age 91, right hemisphere
525.5
Corticomedial amygdala nTPM: 616.7
2428
Male, age 75, right hemisphere
733.0
2535
Female, age 67, right hemisphere
711.8
2829
Male, age 80, left hemisphere
638.0
2242
Female, age 91, right hemisphere
615.6
2429
Female, age 94, left hemisphere
533.4
2240
Male, age 76, both hemispheres
468.1
Lateral amygdala nTPM: 707.5
2534
Female, age 94, left hemisphere
834.9
2830
Female, age 67, right hemisphere
777.7
2256
Male, age 80, left hemisphere
714.4
2516
Male, age 75, right hemisphere
676.6
2255
Female, age 91, right hemisphere
658.5
1883
Male, age 76, both hemispheres
582.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
736.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 736.5
Samples: 152
Max nTPM: 1923.9
Min nTPM: 357.4
Std nTPM: 213.7
Median nTPM: 702.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
1923.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
1243.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
1236.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
1201.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1198.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
1187.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
1161.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
1158.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
1101.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
1059.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
1057.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
1026.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
1020.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
1020.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
1017.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
1011.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
1007.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
1007.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
1001.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
977.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
952.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
952.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
951.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
931.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
921.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
920.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
907.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
891.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
889.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
887.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
878.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
876.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
875.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
871.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
866.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
853.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
849.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
842.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
838.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
830.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
829.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
822.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
819.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
812.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
811.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
803.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
801.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
800.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
798.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
793.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
791.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
789.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
785.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
780.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
775.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
775.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
768.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
766.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
763.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
762.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
760.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
759.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
746.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
746.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
733.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
732.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
722.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
722.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
720.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
717.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
717.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
709.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
705.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
705.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
705.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
703.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
702.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
702.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
698.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
698.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
697.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
691.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
685.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
680.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
676.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
675.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
668.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
660.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
658.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
657.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
655.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
655.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
651.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
650.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
645.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
642.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
639.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
639.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
636.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
635.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
634.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
634.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
628.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
628.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
627.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
626.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
621.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
620.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
618.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
616.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
615.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
609.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
608.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
606.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
605.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
600.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
598.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
598.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
591.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
585.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
577.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
576.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
574.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
563.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
563.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
563.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
561.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
559.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
555.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
548.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
535.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
532.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
524.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
518.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
517.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
514.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
502.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
494.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
478.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
470.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
468.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
467.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
467.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
448.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
435.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
426.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
426.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
417.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
393.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
392.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
373.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
357.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
701.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 701.0
Samples: 4
Max nTPM: 808.6
Min nTPM: 660.8
Sample A
Male
660.8
Sample B
Male
664.3
Sample C
Female
808.6
Sample D
Female
670.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.