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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
271.6
nTPM
GTEx:
271.6
nTPM
FANTOM5:
223.1
Scaled Tags Per Million
Pig:
125.5
nTPM
Mouse:
236.5
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
271.6
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 271.6
Samples: 105
Max nTPM: 368.3
Min nTPM: 121.7
Std nTPM: 46.4
Median nTPM:
396_1
62 years, male
368.3
316_1
62 years, male
365.6
117_1
61 years, male
354.3
142_1
61 years, female
351.8
518_1
75 years, female
351.5
413_1
59 years, female
344.3
320_1
89 years, female
343.7
319_1
81 years, male
336.9
406_1
79 years, male
335.0
6_1
73 years, female
332.6
217_1
76 years, male
326.7
490_1
67 years, female
325.5
145_1
84 years, male
320.6
414_1
84 years, female
319.4
229_1
69 years, female
318.1
313_1
79 years, female
317.4
153_1
70 years, female
316.1
501_1
88 years, male
315.2
335_1
73 years, female
311.5
324_1
76 years, male
311.4
503_1
68 years, male
311.3
415_1
77 years, female
310.4
162_1
79 years, female
309.9
286_1
68 years, female
309.8
137_1
83 years, male
309.7
126_1
63 years, male
308.6
499_1
55 years, female
307.2
379_1
60 years, male
303.0
35_1
74 years, female
301.8
139_1
64 years, female
301.8
425_1
59 years, female
301.0
376_1
75 years, female
300.0
149_1
88 years, male
298.3
43_1
64 years, female
296.5
163_1
78 years, male
296.4
466_1
57 years, female
296.1
468_1
89 years, male
296.1
81_1
67 years, male
293.1
405_1
91 years, male
292.8
18_1
88 years, male
290.7
447_1
81 years, male
287.9
246_1
77 years, male
286.1
189_1
76 years, male
285.2
322_1
76 years, male
284.2
115_1
83 years, male
283.5
32_1
67 years, male
282.9
375_1
74 years, female
281.3
491_1
89 years, female
280.8
265_1
87 years, male
280.1
526_1
61 years, male
279.6
318_1
68 years, male
278.1
17_1
71 years, male
274.7
354_1
81 years, female
274.6
389_1
86 years, female
272.3
264_1
73 years, female
271.5
9_1
66 years, female
271.0
315_1
62 years, female
268.3
288_1
66 years, female
267.3
109_1
81 years, female
267.2
349_1
83 years, male
265.9
386_1
76 years, male
265.1
251_1
78 years, male
265.0
321_1
62 years, female
258.7
292_1
71 years, male
257.5
347_1
72 years, male
257.3
348_1
84 years, male
253.8
172_1
72 years, female
253.7
394_1
75 years, female
252.8
480_1
63 years, male
252.6
177_1
74 years, male
251.6
377_1
82 years, female
251.2
218_1
71 years, female
250.6
352_1
62 years, male
250.1
517_1
88 years, male
249.9
237_1
82 years, male
249.8
404_1
82 years, female
249.3
307_1
66 years, female
246.4
4_1
88 years, female
246.1
42_1
85 years, male
242.5
254_1
77 years, female
240.5
351_1
91 years, male
240.2
311_1
78 years, male
240.0
495_1
57 years, female
236.8
293_1
68 years, female
235.2
120_1
70 years, female
234.8
506_1
65 years, male
232.6
243_1
75 years, male
231.1
119_1
70 years, female
231.0
2_1
77 years, female
227.0
350_1
84 years, female
226.2
266_1
85 years, male
218.4
452_1
88 years, female
217.0
314_1
67 years, male
206.9
291_1
76 years, male
206.0
295_1
61 years, female
205.0
384_1
83 years, male
203.2
41_1
94 years, female
202.0
89_1
63 years, male
199.1
173_1
67 years, male
198.1
99_1
64 years, male
194.5
355_1
70 years, female
192.5
353_1
82 years, female
187.6
356_1
87 years, female
186.3
317_1
60 years, male
156.9
308_1
70 years, female
121.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.