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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
38.2
nTPM
HPA Brain:
58.5
nTPM
GTEx:
38.2
nTPM
FANTOM5:
140.8
Scaled Tags Per Million
Pig:
6.6
nTPM
Mouse:
1.0
nTPM
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
58.5
Sample id
Sample description
nTPM
Amygdala nTPM: 45.9
2695
Female, age 67, right hemisphere
77.9
2814
Male, age 76, right hemisphere
52.0
1987
Female, age 91, left hemisphere
43.2
2517
Female, age 94, left hemisphere
34.2
2514
Male, age 75, right hemisphere
22.1
Basal amygdala nTPM: 41.2
1955
Male, age 76, both hemispheres
52.3
2827
Female, age 67, right hemisphere
49.2
2243
Female, age 91, right hemisphere
43.7
2609
Male, age 75, right hemisphere
36.3
2685
Female, age 94, left hemisphere
34.5
2110
Male, age 80, left hemisphere
31.5
Central amygdala nTPM: 58.5
2515
Male, age 75, right hemisphere
106.0
1905
Male, age 76, both hemispheres
61.6
2826
Female, age 94, left hemisphere
50.8
2701
Female, age 91, right hemisphere
44.5
2239
Male, age 80, left hemisphere
29.5
Corticomedial amygdala nTPM: 36.4
2240
Male, age 76, both hemispheres
46.8
2535
Female, age 67, right hemisphere
40.1
2428
Male, age 75, right hemisphere
36.3
2242
Female, age 91, right hemisphere
35.1
2429
Female, age 94, left hemisphere
34.3
2829
Male, age 80, left hemisphere
26.0
Lateral amygdala nTPM: 48.5
2830
Female, age 67, right hemisphere
67.7
1883
Male, age 76, both hemispheres
55.1
2255
Female, age 91, right hemisphere
49.7
2534
Female, age 94, left hemisphere
46.2
2256
Male, age 80, left hemisphere
44.9
2516
Male, age 75, right hemisphere
27.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
38.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 38.2
Samples: 152
Max nTPM: 400.8
Min nTPM: 3.7
Std nTPM: 57.4
Median nTPM: 18.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
400.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
368.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
223.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
220.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
209.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
183.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
159.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
152.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
136.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
132.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
120.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
92.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
86.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
83.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
82.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
81.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
78.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
73.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
72.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
68.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
67.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
65.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
63.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
62.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
62.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
59.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
56.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
54.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
54.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
53.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
52.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
52.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
51.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
50.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
46.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
45.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
44.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
41.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
41.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
41.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
41.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
40.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
39.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
37.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
37.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
36.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
34.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
34.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
33.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
32.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
32.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
31.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
30.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
29.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
27.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
27.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
26.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
25.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
23.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
23.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
23.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
23.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
22.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
20.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
20.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
20.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
20.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
20.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
20.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
20.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
19.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
19.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
19.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
19.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
18.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
18.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
18.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
18.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
17.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
17.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
16.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
15.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
15.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
15.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
14.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
14.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
13.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
13.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
13.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
13.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
13.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
12.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
12.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
12.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
12.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
11.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
11.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
10.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
10.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
10.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
10.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
10.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
10.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
10.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
10.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
10.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
10.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
10.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
9.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
9.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
9.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
9.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
9.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
9.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
9.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
9.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
9.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
9.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
9.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
9.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
8.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
8.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
8.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
8.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
8.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
8.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
8.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
8.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
8.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
8.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
7.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
7.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
7.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
7.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
7.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
7.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
7.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
7.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
6.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
6.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
6.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
6.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
5.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
5.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
5.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
5.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
5.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
5.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
4.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
4.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
3.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
3.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.