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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
23.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
6.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
5.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
3.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
2.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
2.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
2.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
1.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PHYHIPL is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
48.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
45.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
44.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
38.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
36.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
35.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
28.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
26.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
24.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
24.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
23.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
22.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
20.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
20.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
18.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
18.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
18.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
17.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
16.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
16.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
16.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
16.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
16.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
16.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
16.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
16.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
15.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
15.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
15.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
15.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
15.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
14.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
14.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
14.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
14.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
13.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
13.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
13.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
12.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
12.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
12.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
12.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
12.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
12.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
12.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
12.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
12.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
12.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
12.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
12.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
12.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
11.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
11.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
11.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
11.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
11.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
11.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
11.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
11.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
11.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
11.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
11.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
10.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
10.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
10.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
10.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
10.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
10.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
10.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
10.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
10.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
10.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
10.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
10.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
10.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
10.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
10.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
10.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
9.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
9.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
9.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
9.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
9.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
9.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
9.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
9.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
9.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
9.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
9.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
9.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
9.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
9.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
9.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
9.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
8.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
8.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
8.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
8.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
8.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
8.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
8.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
8.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
8.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
8.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
8.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
8.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
8.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
8.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
8.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
8.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
8.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
8.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
7.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
7.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
7.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
7.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
7.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
7.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
7.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
7.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
7.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
7.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
7.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
7.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
7.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
7.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
7.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
7.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
7.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
7.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
7.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
7.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
7.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
7.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
7.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
7.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
7.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
7.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
7.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
7.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
7.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
7.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
7.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
7.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
7.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
7.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
6.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
6.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
6.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
6.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
6.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
6.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
6.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
6.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
6.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
6.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
6.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
6.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
6.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
6.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
6.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
6.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
6.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
6.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
6.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
6.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
6.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
6.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
6.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
6.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
6.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
6.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
6.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
6.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
6.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
6.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
6.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
6.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
6.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
6.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
6.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
6.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
5.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
5.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
5.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
5.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
5.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
5.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
5.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
5.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
5.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
5.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
5.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
5.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
5.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
5.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
5.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
5.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
5.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
5.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
5.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
5.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
5.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
5.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
5.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
5.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
5.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
5.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
5.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
5.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
5.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
5.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
5.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
5.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
5.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
5.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
5.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
5.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
5.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
5.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
5.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
5.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
5.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
4.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
4.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
4.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
4.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
4.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
4.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
4.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
4.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
4.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
4.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
4.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
4.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
4.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
4.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
4.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
4.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
4.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
4.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
4.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
4.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
4.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
4.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
4.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
4.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
4.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
4.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
4.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
4.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
4.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
4.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
4.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
4.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
4.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
4.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
4.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
4.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
4.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
4.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
4.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
4.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
4.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
4.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
4.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
4.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
4.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
4.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
4.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
4.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
4.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
4.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
4.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
4.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
4.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
4.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
4.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
3.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
3.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
3.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
3.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
3.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
3.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
3.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
3.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
3.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
3.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
3.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
3.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
3.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
3.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
3.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
3.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
3.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
3.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
3.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
3.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
3.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
3.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
3.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
3.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
3.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
3.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
3.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
3.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
3.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
3.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
3.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
3.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
3.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
3.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
3.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
3.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
3.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
2.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
2.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
2.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
2.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
2.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
2.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
2.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
2.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
2.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
2.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
2.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
2.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
2.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
2.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
2.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
2.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
2.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
2.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
2.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
2.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
2.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
2.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
2.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
2.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
2.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
2.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
2.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
2.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
2.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
2.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
2.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
2.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
2.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
2.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
2.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
2.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
2.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
1.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
1.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
1.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
1.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
1.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
1.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
1.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
1.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
1.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
1.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
1.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
1.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
1.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
1.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
1.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
1.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
1.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
1.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
1.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
1.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
1.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
1.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
1.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
1.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
1.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
1.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
1.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
1.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
1.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
1.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
1.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
1.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
1.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
1.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
1.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
1.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
1.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
1.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
1.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
1.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
1.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
1.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
0.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
0.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
0.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
0.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
0.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
0.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
0.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
0.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
0.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
0.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
0.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
0.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
0.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
0.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
0.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
0.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
0.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
0.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
0.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
0.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
0.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
0.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
0.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
0.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
0.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
0.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
0.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
0.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
0.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
0.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
0.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
0.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
0.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
0.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
0.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
0.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
0.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
0.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
0.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
0.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
0.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
0.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
0.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
0.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
0.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
0.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
0.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
0.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
0.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
0.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
0.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
0.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
0.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
0.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PHYHIPL is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
62.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
32.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
21.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
21.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
21.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
21.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
19.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
18.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
16.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
15.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
14.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
14.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
14.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
13.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
13.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
13.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
13.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
13.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
12.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
12.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
12.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
12.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
11.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
11.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
11.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
11.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
11.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
10.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
10.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
10.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
10.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
10.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
9.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
9.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
9.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
9.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
9.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
9.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
8.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
8.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
8.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
7.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
7.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
7.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
7.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
7.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
7.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
6.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
6.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
6.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
6.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
6.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
6.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
6.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
5.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
5.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
5.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
5.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
5.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
5.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
5.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
4.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
4.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
4.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
4.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
4.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
4.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
4.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
3.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
3.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
3.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
3.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
3.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
2.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
2.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
2.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
2.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
2.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
2.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
2.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
1.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
1.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
1.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
1.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
0.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
0.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
0.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
0.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
0.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
0.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
0.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
0.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
0.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
0.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
0.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
0.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
0.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PHYHIPL is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
102.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
100.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
94.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
81.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
58.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
56.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
50.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
50.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
46.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
45.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
45.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
44.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
41.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
41.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
41.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
41.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
40.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
37.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
35.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
35.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
34.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
34.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
33.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
33.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
31.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
30.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
29.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
29.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
29.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
29.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
29.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
29.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
29.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
28.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
28.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
28.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
28.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
27.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
27.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
27.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
27.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
27.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
27.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
27.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
27.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
27.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
27.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
26.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
26.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
25.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
25.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
25.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
25.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
25.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
25.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
24.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
24.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
24.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
24.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
24.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
23.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
22.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
22.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
22.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
22.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
22.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
21.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
21.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
21.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
20.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
20.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
20.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
20.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
20.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
20.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
20.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
19.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
19.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
19.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
19.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
19.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
19.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
19.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
19.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
18.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
18.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
18.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
18.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
18.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
18.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
18.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
17.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
17.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
17.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
17.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
17.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
17.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
17.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
17.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
16.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
16.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
16.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
16.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
16.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
16.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
16.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
16.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
16.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
16.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
15.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
15.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
15.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
15.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
15.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
15.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
15.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
15.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
14.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
14.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
14.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
14.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
14.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
14.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
13.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
13.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
13.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
13.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
13.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
13.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
13.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
12.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
12.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
12.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
12.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
12.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
12.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
12.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
11.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
11.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
11.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
11.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
10.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
10.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
10.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
10.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
10.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
10.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
9.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
9.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
9.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
9.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
9.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
9.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
9.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
9.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
9.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
9.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
9.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
8.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
8.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
8.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
8.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
8.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
8.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
8.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
7.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
7.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
7.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
7.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
7.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
7.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
7.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
6.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
6.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
6.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
6.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
6.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
6.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
6.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
6.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
6.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
6.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
6.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
6.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
6.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
6.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
6.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
5.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
5.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
5.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
5.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
5.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
5.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
5.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
5.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
4.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
4.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
4.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
4.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
3.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
3.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
3.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
2.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
2.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
2.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
2.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
2.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
2.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
2.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
2.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
2.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
1.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
1.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
1.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
1.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
1.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
1.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
1.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
1.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
0.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
0.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
0.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011410003
Tumor
2.1
CPT0088970003
Tumor
1.7
CPT0078800003
Tumor
1.5
CPT0012370003
Tumor
1.4
CPT0002270011
Tumor
1.2
CPT0009060003
Tumor
1.1
CPT0014370004
Tumor
0.8
CPT0078830003
Tumor
0.8
CPT0088480003
Tumor
0.7
CPT0001180009
Tumor
0.6
CPT0079480003
Tumor
0.6
CPT0001540009
Tumor
0.6
CPT0006440003
Tumor
0.6
CPT0024670003
Tumor
0.6
CPT0079270003
Tumor
0.6
CPT0012640003
Normal
0.6
CPT0009080003
Normal
0.5
CPT0007860003
Tumor
0.5
CPT0001350001
Normal
0.5
CPT0001230001
Normal
0.5
CPT0006630003
Tumor
0.5
CPT0089480003
Normal
0.4
CPT0000790001
Normal
0.4
CPT0065810003
Tumor
0.4
CPT0079430001
Normal
0.4
CPT0020130001
Normal
0.4
CPT0001500009
Tumor
0.4
CPT0076350001
Normal
0.4
CPT0065870003
Tumor
0.4
CPT0077140001
Normal
0.4
CPT0065450001
Normal
0.4
CPT0012900004
Tumor
0.4
CPT0088920001
Normal
0.4
CPT0012770003
Normal
0.3
CPT0012090003
Normal
0.3
CPT0086890003
Normal
0.3
CPT0075570001
Normal
0.3
CPT0088780001
Normal
0.3
CPT0006730001
Normal
0.3
CPT0014450004
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0012570003
Normal
0.3
CPT0025580004
Tumor
0.3
CPT0082010001
Normal
0.3
CPT0078530001
Normal
0.3
CPT0077310003
Tumor
0.3
CPT0025920001
Normal
0.2
CPT0086360003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0014160003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0086370003
Normal
0.2
CPT0018250001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0019990003
Tumor
0.2
CPT0023710001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0078840001
Normal
0.2
CPT0015730003
Tumor
0.2
CPT0064400001
Normal
0.2
CPT0007870001
Normal
0.2
CPT0007470001
Normal
0.2
CPT0081620001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0092740003
Normal
0.2
CPT0088500001
Normal
0.2
CPT0079000001
Normal
0.2
CPT0014350001
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0010170001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0077500001
Normal
0.1
CPT0079510001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0079300001
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0023360001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0020020001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0017410003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0079410003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0012670003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0010120001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0065430003
Tumor
-0.2
CPT0086970003
Normal
-0.2
CPT0010160003
Tumor
-0.2
CPT0017850003
Tumor
-0.2
CPT0025050003
Tumor
-0.3
CPT0000870016
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0075170001
Normal
-0.3
CPT0069160003
Tumor
-0.3
CPT0001270001
Normal
-0.3
CPT0019130003
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0065750003
Tumor
-0.4
CPT0015810003
Tumor
-0.4
CPT0086030003
Tumor
-0.4
CPT0011240003
Tumor
-0.4
CPT0087040003
Tumor
-0.4
CPT0081990003
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0063320003
Tumor
-0.5
CPT0092160003
Tumor
-0.5
CPT0071150004
Tumor
-0.5
CPT0084590001
Normal
-0.5
CPT0066470004
Tumor
-0.5
CPT0025290003
Tumor
-0.5
CPT0092790003
Tumor
-0.5
CPT0089020003
Tumor
-0.5
CPT0088760003
Tumor
-0.5
CPT0077320001
Normal
-0.5
CPT0025110003
Tumor
-0.6
CPT0081600003
Tumor
-0.6
CPT0089460004
Tumor
-0.7
CPT0078510003
Tumor
-0.7
CPT0012550003
Tumor
-0.8
CPT0023350003
Tumor
-0.8
CPT0012180003
Tumor
-0.8
CPT0010110003
Tumor
-0.8
CPT0020120003
Tumor
-0.8
CPT0092190003
Normal
-0.9
CPT0006900003
Tumor
-0.9
CPT0088900003
Tumor
-0.9
CPT0000640003
Tumor
-0.9
CPT0077490003
Tumor
-0.9
CPT0075720003
Tumor
-0.9
CPT0009000003
Tumor
-0.9
CPT0065690003
Tumor
-0.9
CPT0066480003
Tumor
-1.0
CPT0092730003
Tumor
-1.0
CPT0069000003
Tumor
-1.0
CPT0012080003
Tumor
-1.0
CPT0088630003
Tumor
-1.1
CPT0078930003
Tumor
-1.1
CPT0015910003
Tumor
-1.1
CPT0079380003
Tumor
-1.1
CPT0086820003
Tumor
-1.2
CPT0021240003
Tumor
-1.2
CPT0085670003
Tumor
-1.3
CPT0086950003
Tumor
-1.3
CPT0075560003
Tumor
-1.3
CPT0092290003
Tumor
-1.4
CPT0023690003
Tumor
-1.5
CPT0076330003
Tumor
-1.5
CPT0012280003
Tumor
-1.5
CPT0075130003
Tumor
-1.6
CPT0081880003
Tumor
-1.6
CPT0079180003
Tumor
-1.8
CPT0084560003
Tumor
-1.9
CPT0088690003
Tumor
-2.1
CPT0063630003
Tumor
-2.3
CPT0001340003
Tumor
-2.4
CPT0078660003
Tumor
-2.5
CPT0088550004
Tumor
-2.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
