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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
125.7
nTPM
HPA Brain:
121.3
nTPM
GTEx:
125.7
nTPM
FANTOM5:
214.9
Scaled Tags Per Million
Pig:
84.6
nTPM
Mouse:
186.8
nTPM
Allen mouse:
22.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
121.3
Sample id
Sample description
nTPM
Amygdala nTPM: 121.3
2514
Male, age 75, right hemisphere
149.3
1987
Female, age 91, left hemisphere
132.9
2695
Female, age 67, right hemisphere
125.1
2517
Female, age 94, left hemisphere
100.1
2814
Male, age 76, right hemisphere
99.3
Basal amygdala nTPM: 91.7
2110
Male, age 80, left hemisphere
111.1
2243
Female, age 91, right hemisphere
106.2
1955
Male, age 76, both hemispheres
100.0
2685
Female, age 94, left hemisphere
91.5
2609
Male, age 75, right hemisphere
82.0
2827
Female, age 67, right hemisphere
59.6
Central amygdala nTPM: 100.3
2515
Male, age 75, right hemisphere
115.1
2826
Female, age 94, left hemisphere
102.0
1905
Male, age 76, both hemispheres
101.7
2701
Female, age 91, right hemisphere
93.1
2239
Male, age 80, left hemisphere
89.5
Corticomedial amygdala nTPM: 101.3
2428
Male, age 75, right hemisphere
124.5
2242
Female, age 91, right hemisphere
114.0
2240
Male, age 76, both hemispheres
113.3
2829
Male, age 80, left hemisphere
95.8
2429
Female, age 94, left hemisphere
91.6
2535
Female, age 67, right hemisphere
68.9
Lateral amygdala nTPM: 90.7
2534
Female, age 94, left hemisphere
111.3
2256
Male, age 80, left hemisphere
102.5
1883
Male, age 76, both hemispheres
102.3
2255
Female, age 91, right hemisphere
92.7
2516
Male, age 75, right hemisphere
72.3
2830
Female, age 67, right hemisphere
63.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
125.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 125.7
Samples: 152
Max nTPM: 289.5
Min nTPM: 50.3
Std nTPM: 45.9
Median nTPM: 118.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
289.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
271.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
243.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
243.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
241.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
240.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
234.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
223.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
222.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
218.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
212.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
205.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
191.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
189.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
188.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
186.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
186.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
179.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
175.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
171.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
170.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
167.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
166.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
166.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
161.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
160.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
159.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
158.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
156.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
155.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
155.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
154.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
154.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
153.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
152.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
152.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
151.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
151.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
150.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
150.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
149.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
147.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
146.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
143.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
141.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
140.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
140.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
139.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
139.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
138.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
138.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
138.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
137.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
136.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
136.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
133.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
132.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
132.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
129.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
128.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
128.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
125.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
125.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
125.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
124.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
123.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
122.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
122.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
121.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
121.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
121.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
120.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
120.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
119.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
119.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
118.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
118.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
117.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
117.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
114.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
114.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
114.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
114.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
113.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
112.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
111.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
111.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
110.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
108.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
108.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
107.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
107.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
107.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
106.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
105.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
104.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
104.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
102.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
102.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
102.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
101.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
100.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
98.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
97.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
97.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
96.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
95.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
95.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
94.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
94.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
94.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
93.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
92.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
92.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
91.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
90.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
90.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
89.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
89.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
89.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
87.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
86.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
86.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
85.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
85.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
84.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
84.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
83.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
83.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
82.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
81.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
79.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
79.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
79.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
78.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
77.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
77.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
76.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
75.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
74.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
72.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
72.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
71.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
70.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
69.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
68.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
62.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
58.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
58.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
58.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
55.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
50.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
186.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 186.8
Samples: 4
Max nTPM: 213.4
Min nTPM: 174.8
Sample A
Male
183.7
Sample B
Male
174.8
Sample C
Female
213.4
Sample D
Female
175.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.