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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
297.2
nTPM
FANTOM5:
390.5
Scaled Tags Per Million
Pig:
190.9
nTPM
Allen mouse:
2.8
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
297.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 242.5
2188
Female, age 91, both hemispheres
293.0
2090
Male, age 80, both hemispheres
240.5
1984
Male, age 76, both hemispheres
222.8
2301
Female, age 85, both hemispheres
213.8
Dorsal cochlear nucleus nTPM: 205.7
2187
Female, age 91, both hemispheres
246.9
2058
Male, age 76, both hemispheres
217.4
2378
Male, age 80, both hemispheres
200.4
2802
Male, age 74, right hemisphere
190.6
2370
Male, age 61, both hemispheres
173.2
Dorsal tegmental nucleus nTPM: 196.9
2083
Male, age 80, both hemispheres
252.7
2326
Male, age 74, both hemispheres
211.4
1936
Male, age 76, left hemisphere
197.6
2358
Male, age 61, both hemispheres
125.8
Dorsolateral tegmental area nTPM: 213.5
2751
Female, age 85, both hemispheres
282.2
2654
Male, age 80, both hemispheres
244.6
2360
Male, age 74, both hemispheres
203.8
2141
Male, age 76, both hemispheres
182.6
2337
Male, age 61, both hemispheres
154.2
Kolliker-Fuse nucleus nTPM: 233.7
2793
Female, age 91, left hemisphere
271.1
2163
Male, age 80, both hemispheres
257.2
2315
Male, age 76, right hemisphere
172.8
Lateral lemniscal nuclei nTPM: 269.6
2746
Female, age 85, left hemisphere
277.9
2169
Male, age 76, both hemispheres
276.7
2036
Male, age 80, both hemispheres
274.0
2320
Female, age 91, left hemisphere
260.1
2453
Male, age 74, right hemisphere
259.6
Lateral parabrachial nucleus nTPM: 230.7
2139
Female, age 85, right hemisphere
255.0
2013
Male, age 80, both hemispheres
248.8
2792
Male, age 76, both hemispheres
237.2
2790
Male, age 61, both hemispheres
181.8
Lateral vestibular nucleus nTPM: 221.5
2184
Male, age 76, both hemispheres
240.0
2311
Male, age 80, both hemispheres
203.1
Locus coeruleus nTPM: 207.1
2014
Male, age 55, unknown
253.9
2162
Male, age 80, both hemispheres
213.6
2788
Male, age 74, unknown
213.0
2720
Male, age 74, both hemispheres
201.5
2317
Female, age 72, unknown
199.4
2123
Female, age 91, both hemispheres
198.5
1980
Male, age 76, both hemispheres
170.2
Medial parabrachial nucleus nTPM: 238.3
2463
Female, age 85, right hemisphere
289.6
2170
Female, age 91, both hemispheres
257.7
2854
Male, age 80, both hemispheres
227.4
2786
Male, age 76, both hemispheres
221.2
2156
Male, age 61, both hemispheres
195.6
Medial periolivary nuclei nTPM: 263.4
2791
Male, age 74, right hemisphere
280.4
2063
Male, age 76, both hemispheres
280.1
2171
Female, age 85, both hemispheres
259.5
2458
Female, age 91, both hemispheres
253.1
2081
Male, age 80, both hemispheres
244.0
Motor facial nucleus nTPM: 248.2
2365
Male, age 74, right hemisphere
294.7
2062
Male, age 76, both hemispheres
281.1
2697
Female, age 85, both hemispheres
257.9
2126
Male, age 61, both hemispheres
243.0
2327
Male, age 80, both hemispheres
209.5
2795
Female, age 91, both hemispheres
202.7
Motor trigeminal nucleus nTPM: 230.5
2560
Male, age 74, both hemispheres
272.8
2079
Male, age 80, both hemispheres
237.9
2321
Female, age 91, both hemispheres
236.1
2309
Male, age 76, both hemispheres
223.4
2335
Male, age 61, both hemispheres
182.5
Nuclei of the trapezoid body nTPM: 264.9
2159
Male, age 61, both hemispheres
311.0
2735
Female, age 85, both hemispheres
259.1
2368
Female, age 91, both hemispheres
252.3
2166
Male, age 80, both hemispheres
251.0
1983
Male, age 76, both hemispheres
250.9
Nucleus raphe magnus nTPM: 259.7
2160
Male, age 61, both hemispheres
297.2
2455
Male, age 74, both hemispheres
289.5
2459
Female, age 91, both hemispheres
266.4
2172
Female, age 85, both hemispheres
238.9
2328
Male, age 80, both hemispheres
235.9
2051
Male, age 76, both hemispheres
230.4
Paramedian reticular nucleus nTPM: 261.8
2050
Female, age 85, both hemispheres
300.2
2057
Male, age 80, both hemispheres
256.0
2052
Male, age 76, both hemispheres
249.0
2313
Male, age 61, both hemispheres
242.1
Pedunculopontine tegmental nucleus nTPM: 223.3
1921
Female, age 85, both hemispheres
248.2
2334
Male, age 80, both hemispheres
217.0
2338
Male, age 61, both hemispheres
204.7
Pontine nuclei nTPM: 292.9
2454
Male, age 74, left hemisphere
374.8
2727
Male, age 61, right hemisphere
319.5
1863
Male, age 55, unknown
303.3
2109
Female, age 72, unknown
293.6
2787
Female, age 85, both hemispheres
288.8
2319
Female, age 91, both hemispheres
283.0
1968
Male, age 76, left hemisphere
269.6
2115
Male, age 80, left hemisphere
210.4
Pontine raphe nucleus nTPM: 240.2
2122
Female, age 85, midline
268.1
2853
Male, age 76, midline
212.4
Posteroventral cochlear nucleus nTPM: 251.6
2135
Female, age 91, both hemispheres
298.7
2070
Male, age 76, both hemispheres
263.1
2752
Female, age 85, both hemispheres
249.9
2341
Male, age 80, both hemispheres
248.1
2371
Male, age 61, both hemispheres
198.5
Principal sensory trigeminal nucleus nTPM: 258.3
2367
Female, age 91, left hemisphere
280.0
2158
Male, age 61, both hemispheres
277.0
2008
Male, age 80, left hemisphere
257.3
2324
Male, age 76, both hemispheres
218.8
Reticular pontine nucleus, caudal nTPM: 262.4
2559
Male, age 74, both hemispheres
295.2
2457
Female, age 91, both hemispheres
278.9
2092
Male, age 76, both hemispheres
263.4
2332
Male, age 80, right hemisphere
212.0
Reticular pontine nucleus, oral nTPM: 297.2
2361
Male, age 74, both hemispheres
396.3
2012
Female, age 85, both hemispheres
299.9
2366
Female, age 91, both hemispheres
298.7
1939
Male, age 80, both hemispheres
248.6
2167
Male, age 76, both hemispheres
242.5
Reticulotegmental nucleus nTPM: 211.8
2452
Male, age 74, both hemispheres
221.3
2322
Female, age 91, both hemispheres
216.2
2325
Male, age 76, both hemispheres
213.7
2333
Male, age 80, both hemispheres
195.9
Spinal trigeminal nucleus, oral nTPM: 233.6
2737
Female, age 85, both hemispheres
251.1
1978
Male, age 76, both hemispheres
231.5
2164
Male, age 80, both hemispheres
218.1
Subcoeruleus area nTPM: 232.3
2369
Female, age 85, left hemisphere
295.9
1958
Male, age 80, both hemispheres
243.0
2089
Male, age 76, left hemisphere
235.4
2323
Female, age 91, left hemisphere
202.4
2451
Male, age 74, both hemispheres
184.7
Superior olive nTPM: 279.2
1875
Female, age 85, both hemispheres
315.5
2364
Male, age 74, right hemisphere
309.9
2020
Male, age 76, both hemispheres
300.3
2561
Female, age 91, both hemispheres
239.5
2329
Male, age 80, right hemisphere
230.8
Ventral periolivary nuclei nTPM: 252.1
2023
Male, age 76, both hemispheres
305.8
2165
Male, age 80, both hemispheres
251.0
2130
Female, age 85, both hemispheres
237.7
2794
Female, age 91, left hemisphere
213.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 247.2
2449
Male, age 74, both hemispheres
276.9
2456
Female, age 91, both hemispheres
259.7
2840
Female, age 85, both hemispheres
250.4
1959
Male, age 76, both hemispheres
243.4
2161
Male, age 80, both hemispheres
232.8
2359
Male, age 61, both hemispheres
220.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
190.9
Pig sample
Sample description
nTPM
Pons nTPM: 191.0
Samples: 4
Max nTPM: 224.1
Min nTPM: 159.8
Sample A
Female
224.1
Sample B
Female
159.8
Sample C
Male
189.4
Sample D
Male
190.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.