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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
105.2
nTPM
HPA Brain:
164.6
nTPM
GTEx:
105.2
nTPM
FANTOM5:
108.3
Scaled Tags Per Million
Pig:
39.7
nTPM
Mouse:
37.2
nTPM
Allen mouse:
0.5
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
164.6
Sample id
Sample description
nTPM
Amygdala nTPM: 164.6
2695
Female, age 67, right hemisphere
251.0
2814
Male, age 76, right hemisphere
153.6
1987
Female, age 91, left hemisphere
150.7
2514
Male, age 75, right hemisphere
142.6
2517
Female, age 94, left hemisphere
125.2
Basal amygdala nTPM: 122.4
2609
Male, age 75, right hemisphere
198.1
2243
Female, age 91, right hemisphere
131.3
1955
Male, age 76, both hemispheres
120.4
2110
Male, age 80, left hemisphere
112.0
2685
Female, age 94, left hemisphere
96.6
2827
Female, age 67, right hemisphere
75.9
Central amygdala nTPM: 141.1
2515
Male, age 75, right hemisphere
172.4
1905
Male, age 76, both hemispheres
164.0
2239
Male, age 80, left hemisphere
128.5
2701
Female, age 91, right hemisphere
127.2
2826
Female, age 94, left hemisphere
113.5
Corticomedial amygdala nTPM: 117.6
2428
Male, age 75, right hemisphere
165.5
2829
Male, age 80, left hemisphere
133.1
2242
Female, age 91, right hemisphere
132.3
2240
Male, age 76, both hemispheres
104.2
2429
Female, age 94, left hemisphere
95.1
2535
Female, age 67, right hemisphere
75.4
Lateral amygdala nTPM: 127.7
2516
Male, age 75, right hemisphere
176.8
1883
Male, age 76, both hemispheres
140.9
2255
Female, age 91, right hemisphere
137.6
2256
Male, age 80, left hemisphere
122.7
2830
Female, age 67, right hemisphere
102.3
2534
Female, age 94, left hemisphere
85.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
105.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 105.2
Samples: 152
Max nTPM: 252.2
Min nTPM: 15.2
Std nTPM: 49.6
Median nTPM: 95.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
252.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
243.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
239.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
239.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
227.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
225.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
218.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
217.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
214.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
213.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
192.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
182.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
181.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
175.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
171.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
170.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
169.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
168.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
167.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
164.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
161.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
156.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
155.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
151.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
149.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
149.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
145.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
143.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
143.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
142.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
142.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
142.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
138.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
137.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
137.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
136.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
135.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
135.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
131.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
128.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
127.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
121.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
120.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
119.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
117.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
117.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
114.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
114.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
114.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
114.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
114.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
113.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
110.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
110.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
110.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
109.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
109.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
109.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
108.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
107.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
107.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
106.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
106.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
105.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
105.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
103.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
102.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
101.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
98.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
98.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
98.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
98.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
97.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
96.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
96.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
95.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
95.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
95.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
95.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
93.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
93.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
93.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
93.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
93.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
93.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
92.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
91.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
91.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
90.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
90.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
89.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
88.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
88.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
87.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
86.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
85.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
85.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
84.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
84.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
84.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
84.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
81.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
80.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
79.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
79.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
79.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
78.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
78.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
78.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
75.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
75.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
74.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
72.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
72.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
71.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
68.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
68.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
68.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
67.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
67.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
66.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
65.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
65.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
65.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
62.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
61.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
61.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
60.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
58.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
58.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
57.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
56.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
56.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
54.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
51.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
51.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
49.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
49.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
47.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
46.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
46.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
44.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
43.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
37.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
36.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
32.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
32.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
32.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
17.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
17.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
16.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
15.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
37.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 37.3
Samples: 4
Max nTPM: 39.6
Min nTPM: 33.4
Sample A
Male
33.4
Sample B
Male
38.6
Sample C
Female
37.4
Sample D
Female
39.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.