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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
137.5
nTPM
GTEx:
137.5
nTPM
FANTOM5:
57.4
Scaled Tags Per Million
Pig:
132.7
nTPM
Mouse:
204.9
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
137.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 137.5
Samples: 105
Max nTPM: 373.4
Min nTPM: 45.6
Std nTPM: 45.6
Median nTPM:
218_1
71 years, female
373.4
117_1
61 years, male
262.3
42_1
85 years, male
218.8
350_1
84 years, female
216.4
6_1
73 years, female
215.8
237_1
82 years, male
207.5
119_1
70 years, female
197.4
375_1
74 years, female
191.8
162_1
79 years, female
191.5
145_1
84 years, male
191.1
2_1
77 years, female
188.8
41_1
94 years, female
185.7
4_1
88 years, female
185.3
173_1
67 years, male
179.6
17_1
71 years, male
179.1
447_1
81 years, male
178.3
386_1
76 years, male
177.1
307_1
66 years, female
176.8
347_1
72 years, male
176.4
311_1
78 years, male
171.4
355_1
70 years, female
171.4
322_1
76 years, male
169.0
35_1
74 years, female
168.3
142_1
61 years, female
168.1
319_1
81 years, male
167.9
348_1
84 years, male
165.9
379_1
60 years, male
165.9
354_1
81 years, female
164.6
320_1
89 years, female
162.1
89_1
63 years, male
161.9
99_1
64 years, male
161.1
43_1
64 years, female
160.8
490_1
67 years, female
158.7
139_1
64 years, female
157.0
351_1
91 years, male
157.0
120_1
70 years, female
155.9
384_1
83 years, male
155.2
318_1
68 years, male
155.1
376_1
75 years, female
151.5
425_1
59 years, female
150.6
352_1
62 years, male
150.0
353_1
82 years, female
149.5
377_1
82 years, female
145.9
137_1
83 years, male
144.2
293_1
68 years, female
141.8
495_1
57 years, female
137.7
394_1
75 years, female
134.0
18_1
88 years, male
132.4
356_1
87 years, female
130.2
172_1
72 years, female
130.1
349_1
83 years, male
129.6
308_1
70 years, female
129.1
491_1
89 years, female
128.0
316_1
62 years, male
127.5
389_1
86 years, female
127.5
317_1
60 years, male
126.7
115_1
83 years, male
126.1
251_1
78 years, male
125.8
243_1
75 years, male
124.0
163_1
78 years, male
123.9
405_1
91 years, male
123.6
321_1
62 years, female
122.8
126_1
63 years, male
121.5
109_1
81 years, female
121.2
406_1
79 years, male
120.5
149_1
88 years, male
120.0
265_1
87 years, male
119.6
32_1
67 years, male
118.7
295_1
61 years, female
117.8
335_1
73 years, female
116.8
452_1
88 years, female
115.3
404_1
82 years, female
112.2
526_1
61 years, male
110.2
518_1
75 years, female
110.1
9_1
66 years, female
110.0
291_1
76 years, male
109.8
396_1
62 years, male
106.2
246_1
77 years, male
106.1
480_1
63 years, male
105.8
292_1
71 years, male
104.9
313_1
79 years, female
104.8
324_1
76 years, male
104.8
177_1
74 years, male
103.1
286_1
68 years, female
103.1
266_1
85 years, male
101.1
254_1
77 years, female
100.8
468_1
89 years, male
100.2
81_1
67 years, male
97.7
315_1
62 years, female
95.0
229_1
69 years, female
93.4
503_1
68 years, male
91.2
153_1
70 years, female
90.9
217_1
76 years, male
89.5
499_1
55 years, female
88.6
517_1
88 years, male
87.7
189_1
76 years, male
86.3
506_1
65 years, male
85.9
264_1
73 years, female
84.8
288_1
66 years, female
83.0
415_1
77 years, female
83.0
314_1
67 years, male
81.3
466_1
57 years, female
67.0
501_1
88 years, male
61.3
414_1
84 years, female
58.0
413_1
59 years, female
45.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.