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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
194.7
nTPM
HPA Brain:
163.6
nTPM
GTEx:
194.7
nTPM
FANTOM5:
49.6
Scaled Tags Per Million
Pig:
29.5
nTPM
Mouse:
66.8
nTPM
Allen mouse:
7.1
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
163.6
Sample id
Sample description
nTPM
Amygdala nTPM: 163.6
1987
Female, age 91, left hemisphere
206.0
2517
Female, age 94, left hemisphere
199.3
2814
Male, age 76, right hemisphere
160.8
2514
Male, age 75, right hemisphere
133.4
2695
Female, age 67, right hemisphere
118.6
Basal amygdala nTPM: 115.9
2110
Male, age 80, left hemisphere
163.0
1955
Male, age 76, both hemispheres
136.4
2243
Female, age 91, right hemisphere
132.4
2685
Female, age 94, left hemisphere
97.9
2827
Female, age 67, right hemisphere
87.9
2609
Male, age 75, right hemisphere
77.8
Central amygdala nTPM: 127.9
2239
Male, age 80, left hemisphere
173.1
2826
Female, age 94, left hemisphere
144.2
1905
Male, age 76, both hemispheres
132.2
2515
Male, age 75, right hemisphere
107.9
2701
Female, age 91, right hemisphere
82.1
Corticomedial amygdala nTPM: 86.0
2240
Male, age 76, both hemispheres
131.6
2829
Male, age 80, left hemisphere
115.9
2428
Male, age 75, right hemisphere
70.8
2242
Female, age 91, right hemisphere
67.1
2429
Female, age 94, left hemisphere
65.3
2535
Female, age 67, right hemisphere
65.2
Lateral amygdala nTPM: 110.0
2256
Male, age 80, left hemisphere
157.8
2516
Male, age 75, right hemisphere
113.0
2830
Female, age 67, right hemisphere
108.4
2534
Female, age 94, left hemisphere
99.0
1883
Male, age 76, both hemispheres
97.2
2255
Female, age 91, right hemisphere
84.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
194.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 194.7
Samples: 152
Max nTPM: 779.5
Min nTPM: 17.2
Std nTPM: 109.9
Median nTPM: 171.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
779.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
600.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
569.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
552.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
484.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
465.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
434.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
420.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
411.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
407.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
389.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
341.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
340.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
326.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
313.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
312.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
310.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
300.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
290.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
279.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
277.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
274.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
264.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
260.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
260.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
258.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
257.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
246.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
246.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
242.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
240.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
237.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
236.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
234.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
232.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
230.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
230.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
229.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
224.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
223.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
221.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
220.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
220.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
219.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
219.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
216.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
209.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
208.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
205.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
201.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
198.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
198.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
198.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
197.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
197.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
196.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
196.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
196.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
195.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
192.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
190.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
186.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
185.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
185.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
185.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
181.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
180.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
180.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
179.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
179.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
179.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
176.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
174.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
173.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
173.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
172.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
169.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
169.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
169.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
167.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
167.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
166.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
163.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
162.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
161.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
160.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
160.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
160.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
160.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
157.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
155.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
155.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
152.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
152.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
148.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
148.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
148.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
148.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
147.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
146.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
146.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
144.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
143.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
142.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
142.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
141.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
141.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
140.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
139.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
137.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
136.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
133.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
128.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
128.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
126.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
121.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
119.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
119.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
117.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
115.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
114.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
112.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
111.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
111.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
110.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
106.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
106.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
105.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
104.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
104.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
103.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
102.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
97.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
97.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
95.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
95.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
93.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
92.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
91.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
90.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
89.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
89.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
88.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
88.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
87.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
80.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
79.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
69.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
62.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
59.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
36.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
17.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
66.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 66.8
Samples: 4
Max nTPM: 77.6
Min nTPM: 62.3
Sample A
Male
77.6
Sample B
Male
62.5
Sample C
Female
62.3
Sample D
Female
64.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.