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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
148.0
nTPM
GTEx:
148.0
nTPM
FANTOM5:
313.1
Scaled Tags Per Million
Pig:
7.2
nTPM
Mouse:
55.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
148.0
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 148.0
Samples: 105
Max nTPM: 440.0
Min nTPM: 7.7
Std nTPM: 114.6
Median nTPM:
394_1
75 years, female
440.0
109_1
81 years, female
419.1
389_1
86 years, female
382.6
349_1
83 years, male
350.8
288_1
66 years, female
347.7
452_1
88 years, female
345.8
335_1
73 years, female
344.6
137_1
83 years, male
327.9
354_1
81 years, female
327.4
351_1
91 years, male
327.0
189_1
76 years, male
322.3
315_1
62 years, female
320.1
4_1
88 years, female
314.6
254_1
77 years, female
314.0
145_1
84 years, male
308.7
17_1
71 years, male
295.9
291_1
76 years, male
295.3
295_1
61 years, female
291.0
162_1
79 years, female
281.4
353_1
82 years, female
279.7
18_1
88 years, male
276.3
43_1
64 years, female
266.7
314_1
67 years, male
266.5
173_1
67 years, male
251.2
518_1
75 years, female
245.5
317_1
60 years, male
236.2
350_1
84 years, female
235.0
526_1
61 years, male
220.3
41_1
94 years, female
218.4
379_1
60 years, male
216.3
6_1
73 years, female
216.1
501_1
88 years, male
214.1
384_1
83 years, male
208.5
319_1
81 years, male
207.3
117_1
61 years, male
205.7
491_1
89 years, female
201.1
386_1
76 years, male
200.2
320_1
89 years, female
177.3
490_1
67 years, female
176.8
307_1
66 years, female
176.3
415_1
77 years, female
172.5
265_1
87 years, male
169.3
324_1
76 years, male
167.3
243_1
75 years, male
166.5
466_1
57 years, female
161.4
32_1
67 years, male
149.4
375_1
74 years, female
148.3
218_1
71 years, female
147.0
9_1
66 years, female
132.3
517_1
88 years, male
127.6
264_1
73 years, female
126.1
99_1
64 years, male
111.8
229_1
69 years, female
105.6
139_1
64 years, female
101.5
316_1
62 years, male
98.3
348_1
84 years, male
97.1
308_1
70 years, female
96.4
322_1
76 years, male
96.4
217_1
76 years, male
95.7
318_1
68 years, male
90.3
503_1
68 years, male
89.9
414_1
84 years, female
89.6
396_1
62 years, male
83.9
376_1
75 years, female
82.6
406_1
79 years, male
77.4
251_1
78 years, male
74.6
447_1
81 years, male
74.6
120_1
70 years, female
71.5
313_1
79 years, female
70.1
286_1
68 years, female
68.7
347_1
72 years, male
67.5
142_1
61 years, female
62.9
115_1
83 years, male
59.4
352_1
62 years, male
59.3
404_1
82 years, female
58.2
35_1
74 years, female
52.4
172_1
72 years, female
47.5
405_1
91 years, male
45.4
480_1
63 years, male
42.5
499_1
55 years, female
42.1
149_1
88 years, male
41.9
321_1
62 years, female
41.9
468_1
89 years, male
38.9
425_1
59 years, female
38.4
495_1
57 years, female
38.4
153_1
70 years, female
37.8
126_1
63 years, male
35.2
292_1
71 years, male
33.6
81_1
67 years, male
30.1
42_1
85 years, male
29.8
2_1
77 years, female
26.3
506_1
65 years, male
22.8
266_1
85 years, male
22.4
119_1
70 years, female
21.9
237_1
82 years, male
20.2
377_1
82 years, female
18.7
177_1
74 years, male
18.4
311_1
78 years, male
14.7
355_1
70 years, female
14.5
293_1
68 years, female
14.3
89_1
63 years, male
12.0
413_1
59 years, female
12.0
163_1
78 years, male
9.6
356_1
87 years, female
7.8
246_1
77 years, male
7.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.