HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:85.8 nTPM
HPA Brain:58.8 nTPM
GTEx:85.8 nTPM
FANTOM5:95.1 Scaled Tags Per Million
Pig:1.2 nTPM
Mouse:16.4 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001925
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 58.8
Sample id Sample description nTPM
Hippocampus
nTPM: 47.5
1855 Male, age 76, left hemisphere 52.8
2621 Female, age 67, right hemisphere 50.3
2529 Female, age 94, left hemisphere 49.9
1898 Male, age 80, left hemisphere 49.8
1911 Female, age 85, right hemisphere 43.1
2148 Female, age 91, left hemisphere 39.2
Dentate gyrus
nTPM: 58.8
2010 Male, age 76, both hemispheres 72.6
2530 Female, age 94, left hemisphere 71.6
2531 Female, age 67, both hemispheres 67.7
2246 Female, age 85, both hemispheres 58.9
2528 Male, age 74, both hemispheres 50.7
1927 Female, age 91, both hemispheres 31.2
Entorhinal gyrus
nTPM: 36.8
2686 Male, age 75, right hemisphere 45.9
2117 Female, age 91, right hemisphere 45.2
1787 Male, age 76, left hemisphere 37.9
2764 Male, age 80, right hemisphere 35.4
1938 Female, age 85, left hemisphere 30.5
2613 Female, age 94, left hemisphere 26.0
Hippocampus, CA1
nTPM: 48.6
2082 Female, age 91, right hemisphere 71.4
2045 Male, age 76, both hemispheres 50.9
2527 Male, age 74, both hemispheres 48.3
1873 Female, age 85, both hemispheres 40.3
2749 Male, age 80, left hemisphere 32.1
Hippocampus, CA2
nTPM: 50.2
2249 Male, age 74, both hemispheres 65.7
2437 Female, age 94, left hemisphere 58.0
1940 Female, age 85, left hemisphere 53.4
2113 Female, age 91, right hemisphere 46.7
1963 Male, age 80, left hemisphere 42.7
1892 Male, age 76, both hemispheres 34.5
Hippocampus, CA3
nTPM: 48.9
2861 Female, age 67, both hemispheres 67.5
1867 Male, age 76, both hemispheres 51.1
2436 Male, age 74, both hemispheres 45.0
2137 Male, age 80, left hemisphere 44.3
2620 Female, age 94, left hemisphere 44.2
1891 Female, age 85, both hemispheres 41.3
Parahippocampal cortex
nTPM: 38.4
2018 Male, age 76, both hemispheres 60.4
2245 Female, age 91, both hemispheres 41.0
2250 Female, age 67, right hemisphere 37.2
1990 Female, age 91, right hemisphere 37.1
2532 Female, age 72, left hemisphere 36.5
2622 Female, age 67, right hemisphere 36.1
1933 Female, age 85, both hemispheres 35.3
2692 Male, age 74, both hemispheres 34.6
1850 Male, age 80, both hemispheres 34.0
2693 Female, age 94, both hemispheres 31.1
Perirhinal gyrus
nTPM: 35.0
1841 Female, age 85, right hemisphere 36.7
1847 Female, age 91, left hemisphere 36.5
1794 Male, age 80, right hemisphere 36.4
2521 Female, age 94, right hemisphere 35.6
2848 Male, age 76, right hemisphere 29.8
Subiculum
nTPM: 48.1
2042 Male, age 76, both hemispheres 71.4
2729 Female, age 91, right hemisphere 47.1
1977 Female, age 85, both hemispheres 45.7
1901 Male, age 80, both hemispheres 41.9
2438 Female, age 94, left hemisphere 41.2
2619 Male, age 74, both hemispheres 41.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 85.8
GTEx sample id Sample description nTPM
50.372.499.623.3173.5050100150200250300350
Brain - Hippocampus
Average nTPM: 85.8
Samples: 197

Max nTPM: 351.0
Min nTPM: 23.3
Std nTPM: 51.7
Median nTPM: 72.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 351.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 342.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 274.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 251.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 217.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 197.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 186.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 185.1
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 183.7
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 181.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 180.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 95.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 95.1
FF:10153-102I9 76 years, female 110.3
FF:10169-103B7 60 years, female 79.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 1.2
Pig sample Sample description nTPM
0.70.91.20.61.40.00.10.20.30.40.50.60.70.80.91.01.11.21.31.4
 		Subiculum
nTPM: 1.0
Samples: 4

Max nTPM: 1.4
Min nTPM: 0.6
Sample A Female 0.6
Sample B Female 1.1
Sample C Male 1.4
Sample D Male 0.7
1.11.11.20.91.10.00.20.40.60.81.01.21.41.6
 		Dorsal hippocampus
nTPM: 1.2
Samples: 4

Max nTPM: 1.6
Min nTPM: 0.9
Sample A Female 0.9
Sample B Female 1.6
Sample C Male 1.1
Sample D Male 1.1
0.80.80.90.70.80.00.10.20.30.40.50.60.70.80.91.01.11.2
 		Entorhinal cortex
nTPM: 0.9
Samples: 4

Max nTPM: 1.2
Min nTPM: 0.7
Sample A Female 0.8
Sample B Female 0.7
Sample C Male 0.8
Sample D Male 1.2
0.91.01.01.01.10.00.10.20.30.40.50.60.70.80.91.01.1
 		Ventral hippocampus
nTPM: 1.0
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.7
Sample A Female 1.0
Sample B Female 1.0
Sample C Male 1.1
Sample D Male 0.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 16.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.0
Samples: 4

Max nTPM: 15.4
Min nTPM: 13.1
Sample A Male 15.4
Sample B Male 14.0
Sample C Female 13.1
Sample D Female 13.4
15.616.417.214.018.8024681012141618
 		Hippocampal formation
nTPM: 16.4
Samples: 4

Max nTPM: 18.8
Min nTPM: 14.0
Sample A Male 14.0
Sample B Male 16.6
Sample C Female 16.2
Sample D Female 18.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
68269294 Antisense, RP_041129_01_F02, Mouse strain C57BL/6J (56 days, male) 0.0

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