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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCDH1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
141.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
139.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
139.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
135.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
128.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
114.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
106.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
106.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
99.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
97.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
88.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
79.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
79.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
78.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
75.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
74.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
70.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
69.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
66.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
64.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
63.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
62.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
61.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
59.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
56.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
52.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
51.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
47.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
46.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
44.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
41.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
40.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
39.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
38.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
35.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
35.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
33.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
33.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
32.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
31.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
30.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
28.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
27.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
26.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
25.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
25.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
24.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
23.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
22.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
22.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
22.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
21.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
21.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
20.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
20.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
19.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
18.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
16.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
15.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
8.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
2.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCDH1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
67.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
56.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
55.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
55.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
55.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
54.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
51.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
50.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
47.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
46.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
45.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
44.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
43.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
42.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
41.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
40.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
39.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
39.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
39.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
39.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
39.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
38.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
37.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
36.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
36.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
35.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
35.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
35.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
35.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
34.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
34.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
33.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
33.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
33.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
33.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
33.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
32.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
31.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
31.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
31.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
31.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
31.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
31.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
31.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
30.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
30.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
30.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
29.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
29.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
29.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
29.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
29.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
28.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
28.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
28.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
27.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
27.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
27.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
27.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
27.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
27.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
27.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
27.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
26.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
26.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
26.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
26.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
26.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
26.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
25.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
25.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
25.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
25.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
25.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
25.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
25.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
25.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
24.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
24.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
24.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
24.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
24.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
24.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
24.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
24.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
24.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
23.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
23.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
23.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
23.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
23.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
23.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
23.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
23.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
23.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
22.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
22.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
22.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
22.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
22.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
22.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
22.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
22.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
22.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
22.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
22.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
21.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
21.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
21.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
21.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
21.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
21.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
21.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
21.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
21.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
20.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
20.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
20.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
20.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
20.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
20.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
20.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
20.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
20.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
20.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
20.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
19.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
19.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
19.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
19.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
19.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
19.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
19.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
19.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
19.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
19.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
19.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
19.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
19.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
18.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
18.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
18.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
18.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
18.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
18.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
18.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
18.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
18.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
18.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
18.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
17.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
17.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
17.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
17.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
17.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
17.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
17.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
17.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
17.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
17.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
17.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
17.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
17.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
17.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
17.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
17.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
17.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
16.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
16.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
16.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
16.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
16.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
16.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
16.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
16.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
16.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
16.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
16.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
16.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
16.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
15.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
15.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
15.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
15.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
15.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
15.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
15.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
15.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
15.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
15.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
15.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
15.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
15.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
15.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
15.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
15.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
15.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
15.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
15.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
15.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
15.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
15.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
15.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
14.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
14.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
14.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
14.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
14.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
14.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
14.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
14.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
14.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
14.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
14.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
14.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
14.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
14.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
14.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
14.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
14.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
14.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
14.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
14.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
14.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
14.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
14.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
14.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
14.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
14.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
14.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
13.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
13.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
13.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
13.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
13.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
13.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
13.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
13.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
13.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
13.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
12.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
12.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
12.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
12.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
12.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
12.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
12.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
12.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
12.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
12.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
12.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
12.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
12.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
12.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
12.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
12.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
12.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
12.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
12.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
12.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
12.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
12.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
11.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
11.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
11.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
11.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
11.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
11.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
11.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
11.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
11.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
11.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
11.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
11.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
11.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
11.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
11.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
10.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
10.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
10.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
10.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
10.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
10.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
10.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
10.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
10.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
10.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
10.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
10.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
10.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
10.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
10.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
9.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
9.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
9.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
9.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
9.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
9.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
9.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
9.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
9.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
9.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
9.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
9.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
9.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
9.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
9.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
9.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
8.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
8.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
8.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
8.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
8.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
8.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
8.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
8.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
8.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
8.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
8.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
8.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
8.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
8.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
8.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
8.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
8.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
8.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
8.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
8.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
8.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
7.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
7.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
7.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
7.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
7.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
7.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
7.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
7.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
7.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
7.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
7.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
7.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
7.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
6.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
6.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
6.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
6.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
6.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
6.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
6.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
6.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
6.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
6.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
5.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
5.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
5.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
5.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
5.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
5.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
5.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
5.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
5.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
5.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
5.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
5.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
5.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
5.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
5.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
5.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
5.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
5.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
5.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
5.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
5.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
5.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
5.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
5.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
4.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
4.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
4.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
4.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
4.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
4.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
4.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
4.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
4.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
4.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
4.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
4.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
4.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
4.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
4.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
4.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
3.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
3.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
3.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
3.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
3.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
3.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
3.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
3.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
3.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
3.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
3.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
3.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
3.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
3.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
3.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
3.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
2.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
2.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
2.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
2.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
2.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
2.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
1.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
1.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
1.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
1.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCDH1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
44.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
38.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
38.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
31.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
28.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
27.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
27.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
26.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
26.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
25.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
25.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
24.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
24.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
23.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
22.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
21.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
20.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
19.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
19.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
18.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
16.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
16.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
16.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
16.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
15.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
15.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
15.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
15.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
14.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
13.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
13.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
13.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
12.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
12.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
11.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
11.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
11.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
10.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
9.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
9.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
9.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
9.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
9.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
9.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
9.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
9.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
8.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
8.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
8.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
8.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
8.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
8.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
8.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
8.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
8.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
7.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
7.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
7.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
7.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
7.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
7.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
6.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
6.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
6.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
6.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
6.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
5.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
5.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
5.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
5.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
5.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
5.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
5.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
5.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
5.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
5.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
5.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
4.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
4.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
4.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
4.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
4.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
3.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
3.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
2.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
2.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
1.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
1.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCDH1 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
131.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
107.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
95.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
88.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
68.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
56.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
54.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
50.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
46.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
45.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
44.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
40.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
39.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
32.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
31.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
30.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
29.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
29.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
26.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
25.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
25.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
24.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
24.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
21.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
21.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
19.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
19.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
18.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
18.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
18.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
17.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
17.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
16.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
15.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
15.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
15.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
15.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
14.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
14.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
14.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
14.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
14.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
14.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
13.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
12.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
12.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
12.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
11.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
11.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
11.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
10.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
10.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
9.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
9.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
9.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
9.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
8.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
8.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
8.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
8.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
8.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
7.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
7.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
7.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
7.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
6.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
6.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
5.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
5.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
5.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
5.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
5.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
5.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
5.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
5.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
5.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
5.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
5.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
4.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
4.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
4.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
4.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
4.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
4.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
4.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
4.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
4.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
4.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
4.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
4.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
4.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
4.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
4.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
4.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
3.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
3.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
3.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
3.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
3.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
3.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
3.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
3.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
3.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
3.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
3.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
3.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
3.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
3.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
3.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
3.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
3.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
3.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
3.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
3.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
3.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
3.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
3.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
3.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
3.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
2.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
2.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
2.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
2.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
2.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
2.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
2.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
2.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
2.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
2.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
2.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
2.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
2.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
2.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
2.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
2.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
2.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
2.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
2.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
2.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
2.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
2.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
2.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
2.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
1.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
1.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
1.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
1.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
1.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
1.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
1.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
1.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
1.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
1.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
1.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
1.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
1.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
1.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
1.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
1.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
1.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
1.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
1.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
1.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
1.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
1.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
1.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
1.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
1.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
1.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
1.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
1.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
1.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
1.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
1.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
1.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
1.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
1.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
1.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
1.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
1.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
1.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
1.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
1.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
1.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
1.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
1.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
1.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
1.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
1.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
1.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
1.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
1.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
1.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
1.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
1.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
1.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
1.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
1.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
1.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
1.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
0.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
0.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
0.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
0.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
0.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
0.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
0.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
0.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
0.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
0.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
0.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
0.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
0.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
0.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
0.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
0.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
0.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
0.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
0.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
0.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
0.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
0.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
0.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
0.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
0.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
0.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
0.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
0.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
0.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
0.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
0.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
0.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
0.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
0.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
0.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
0.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
0.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
0.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
0.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
0.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
0.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
0.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
0.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
0.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
2.4
CPT0078660003
Tumor
2.1
CPT0069000003
Tumor
1.8
CPT0024670003
Tumor
0.7
CPT0088760003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0079510001
Normal
0.5
CPT0014450004
Tumor
0.5
CPT0065450001
Normal
0.5
CPT0026420001
Normal
0.4
CPT0001180009
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0092310003
Normal
0.4
CPT0077500001
Normal
0.4
CPT0010160003
Tumor
0.4
CPT0066430001
Normal
0.4
CPT0069010001
Normal
0.3
CPT0069190001
Normal
0.3
CPT0012770003
Normal
0.3
CPT0077140001
Normal
0.3
CPT0076330003
Tumor
0.3
CPT0088710001
Normal
0.3
CPT0077490003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0001350001
Normal
0.3
CPT0079300001
Normal
0.3
CPT0066520001
Normal
0.3
CPT0025920001
Normal
0.3
CPT0076350001
Normal
0.3
CPT0078530001
Normal
0.3
CPT0075570001
Normal
0.3
CPT0025060001
Normal
0.3
CPT0012290003
Normal
0.3
CPT0088640003
Normal
0.3
CPT0020020001
Normal
0.3
CPT0001510001
Normal
0.2
CPT0023360001
Normal
0.2
CPT0010170001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0069160003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0001190001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0079480003
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0009020003
Normal
0.2
CPT0092730003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0087050003
Normal
0.2
CPT0078670001
Normal
0.2
CPT0078940001
Normal
0.2
CPT0078840001
Normal
0.2
CPT0012080003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0089460004
Tumor
0.2
CPT0025610001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0075170001
Normal
0.2
CPT0017450001
Normal
0.2
CPT0092800003
Normal
0.1
CPT0089040001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0014350001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0088780001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0012570003
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0012920003
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0088920001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0082010001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0012550003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0019160001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0086890003
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0012670003
Tumor
-0.1
CPT0012900004
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0023350003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0084590001
Normal
-0.2
CPT0086030003
Tumor
-0.2
CPT0012370003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0006900003
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0065430003
Tumor
-0.2
CPT0001500009
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0009000003
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0085670003
Tumor
-0.2
CPT0025580004
Tumor
-0.3
CPT0079270003
Tumor
-0.3
CPT0021240003
Tumor
-0.3
CPT0079230003
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0001270001
Normal
-0.3
CPT0065930003
Tumor
-0.3
CPT0025290003
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0092190003
Normal
-0.4
CPT0026410003
Tumor
-0.4
CPT0075130003
Tumor
-0.4
CPT0078990003
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0002350011
Tumor
-0.4
CPT0086950003
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0025230003
Tumor
-0.5
CPT0086820003
Tumor
-0.5
CPT0086870003
Tumor
-0.5
CPT0001220008
Tumor
-0.5
CPT0006440003
Tumor
-0.5
CPT0065810003
Tumor
-0.5
CPT0088480003
Tumor
-0.6
CPT0092160003
Tumor
-0.6
CPT0088970003
Tumor
-0.6
CPT0025110003
Tumor
-0.6
CPT0007320003
Tumor
-0.6
CPT0012180003
Tumor
-0.7
CPT0086360003
Tumor
-0.7
CPT0079380003
Tumor
-0.7
CPT0001340003
Tumor
-0.7
CPT0009060003
Tumor
-0.7
CPT0088690003
Tumor
-0.7
CPT0001540009
Tumor
-0.8
CPT0084560003
Tumor
-0.8
CPT0063630003
Tumor
-0.8
CPT0012280003
Tumor
-0.9
CPT0001260009
Tumor
-0.9
CPT0088550004
Tumor
-1.0
CPT0010110003
Tumor
-1.0
CPT0025050003
Tumor
-1.1
CPT0011410003
Tumor
-1.1
CPT0015730003
Tumor
-1.2
CPT0078800003
Tumor
-1.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
