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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
233.2
nTPM
FANTOM5:
936.0
Scaled Tags Per Million
Pig:
726.4
nTPM
Allen mouse:
18.1
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
233.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 91.8
1984
Male, age 76, both hemispheres
109.7
2301
Female, age 85, both hemispheres
102.3
2188
Female, age 91, both hemispheres
99.6
2090
Male, age 80, both hemispheres
55.4
Dorsal cochlear nucleus nTPM: 82.6
2187
Female, age 91, both hemispheres
105.0
2370
Male, age 61, both hemispheres
90.9
2058
Male, age 76, both hemispheres
87.9
2802
Male, age 74, right hemisphere
71.2
2378
Male, age 80, both hemispheres
58.0
Dorsal tegmental nucleus nTPM: 95.6
2083
Male, age 80, both hemispheres
117.4
2358
Male, age 61, both hemispheres
103.8
1936
Male, age 76, left hemisphere
93.6
2326
Male, age 74, both hemispheres
67.5
Dorsolateral tegmental area nTPM: 75.5
2141
Male, age 76, both hemispheres
97.0
2654
Male, age 80, both hemispheres
91.9
2751
Female, age 85, both hemispheres
79.3
2360
Male, age 74, both hemispheres
71.8
2337
Male, age 61, both hemispheres
37.8
Kolliker-Fuse nucleus nTPM: 138.7
2163
Male, age 80, both hemispheres
217.2
2793
Female, age 91, left hemisphere
141.4
2315
Male, age 76, right hemisphere
57.4
Lateral lemniscal nuclei nTPM: 175.8
2169
Male, age 76, both hemispheres
246.9
2453
Male, age 74, right hemisphere
225.6
2036
Male, age 80, both hemispheres
179.0
2320
Female, age 91, left hemisphere
115.3
2746
Female, age 85, left hemisphere
112.1
Lateral parabrachial nucleus nTPM: 93.5
2139
Female, age 85, right hemisphere
168.0
2013
Male, age 80, both hemispheres
89.3
2790
Male, age 61, both hemispheres
78.1
2792
Male, age 76, both hemispheres
38.5
Lateral vestibular nucleus nTPM: 158.6
2184
Male, age 76, both hemispheres
227.1
2311
Male, age 80, both hemispheres
90.1
Locus coeruleus nTPM: 164.0
2720
Male, age 74, both hemispheres
220.2
2123
Female, age 91, both hemispheres
219.3
2162
Male, age 80, both hemispheres
165.3
1980
Male, age 76, both hemispheres
155.7
2788
Male, age 74, unknown
144.2
2014
Male, age 55, unknown
143.3
2317
Female, age 72, unknown
100.3
Medial parabrachial nucleus nTPM: 118.3
2854
Male, age 80, both hemispheres
164.9
2156
Male, age 61, both hemispheres
135.9
2786
Male, age 76, both hemispheres
129.8
2170
Female, age 91, both hemispheres
99.1
2463
Female, age 85, right hemisphere
61.5
Medial periolivary nuclei nTPM: 160.6
2171
Female, age 85, both hemispheres
283.8
2063
Male, age 76, both hemispheres
185.4
2791
Male, age 74, right hemisphere
133.1
2458
Female, age 91, both hemispheres
125.0
2081
Male, age 80, both hemispheres
75.5
Motor facial nucleus nTPM: 159.1
2697
Female, age 85, both hemispheres
209.4
2327
Male, age 80, both hemispheres
209.0
2365
Male, age 74, right hemisphere
177.3
2062
Male, age 76, both hemispheres
173.0
2126
Male, age 61, both hemispheres
94.3
2795
Female, age 91, both hemispheres
91.7
Motor trigeminal nucleus nTPM: 135.3
2560
Male, age 74, both hemispheres
160.4
2079
Male, age 80, both hemispheres
146.4
2309
Male, age 76, both hemispheres
136.8
2335
Male, age 61, both hemispheres
121.0
2321
Female, age 91, both hemispheres
112.0
Nuclei of the trapezoid body nTPM: 184.2
2159
Male, age 61, both hemispheres
260.0
2735
Female, age 85, both hemispheres
215.9
1983
Male, age 76, both hemispheres
172.1
2166
Male, age 80, both hemispheres
166.4
2368
Female, age 91, both hemispheres
106.8
Nucleus raphe magnus nTPM: 233.2
2172
Female, age 85, both hemispheres
367.6
2160
Male, age 61, both hemispheres
287.3
2455
Male, age 74, both hemispheres
239.5
2328
Male, age 80, both hemispheres
201.8
2051
Male, age 76, both hemispheres
164.1
2459
Female, age 91, both hemispheres
138.9
Paramedian reticular nucleus nTPM: 137.3
2050
Female, age 85, both hemispheres
200.7
2313
Male, age 61, both hemispheres
134.1
2057
Male, age 80, both hemispheres
114.0
2052
Male, age 76, both hemispheres
100.4
Pedunculopontine tegmental nucleus nTPM: 119.8
2334
Male, age 80, both hemispheres
122.1
1921
Female, age 85, both hemispheres
120.3
2338
Male, age 61, both hemispheres
117.0
Pontine nuclei nTPM: 165.2
2787
Female, age 85, both hemispheres
327.2
1863
Male, age 55, unknown
225.2
1968
Male, age 76, left hemisphere
172.1
2727
Male, age 61, right hemisphere
160.9
2109
Female, age 72, unknown
126.1
2454
Male, age 74, left hemisphere
125.5
2115
Male, age 80, left hemisphere
108.6
2319
Female, age 91, both hemispheres
76.0
Pontine raphe nucleus nTPM: 134.5
2122
Female, age 85, midline
151.6
2853
Male, age 76, midline
117.3
Posteroventral cochlear nucleus nTPM: 81.8
2752
Female, age 85, both hemispheres
151.1
2070
Male, age 76, both hemispheres
135.7
2371
Male, age 61, both hemispheres
57.7
2341
Male, age 80, both hemispheres
53.6
2135
Female, age 91, both hemispheres
10.8
Principal sensory trigeminal nucleus nTPM: 170.8
2158
Male, age 61, both hemispheres
229.2
2324
Male, age 76, both hemispheres
184.8
2008
Male, age 80, left hemisphere
140.5
2367
Female, age 91, left hemisphere
128.8
Reticular pontine nucleus, caudal nTPM: 143.2
2332
Male, age 80, right hemisphere
219.5
2092
Male, age 76, both hemispheres
149.8
2457
Female, age 91, both hemispheres
122.7
2559
Male, age 74, both hemispheres
80.7
Reticular pontine nucleus, oral nTPM: 128.1
2361
Male, age 74, both hemispheres
159.6
2366
Female, age 91, both hemispheres
133.3
2167
Male, age 76, both hemispheres
133.0
2012
Female, age 85, both hemispheres
122.2
1939
Male, age 80, both hemispheres
92.4
Reticulotegmental nucleus nTPM: 137.0
2325
Male, age 76, both hemispheres
155.8
2452
Male, age 74, both hemispheres
142.1
2322
Female, age 91, both hemispheres
128.1
2333
Male, age 80, both hemispheres
121.8
Spinal trigeminal nucleus, oral nTPM: 159.1
2164
Male, age 80, both hemispheres
195.2
2737
Female, age 85, both hemispheres
151.2
1978
Male, age 76, both hemispheres
130.8
Subcoeruleus area nTPM: 126.6
1958
Male, age 80, both hemispheres
171.2
2323
Female, age 91, left hemisphere
165.7
2089
Male, age 76, left hemisphere
126.5
2451
Male, age 74, both hemispheres
104.3
2369
Female, age 85, left hemisphere
65.0
Superior olive nTPM: 142.7
1875
Female, age 85, both hemispheres
181.8
2329
Male, age 80, right hemisphere
166.6
2561
Female, age 91, both hemispheres
133.1
2364
Male, age 74, right hemisphere
116.5
2020
Male, age 76, both hemispheres
115.6
Ventral periolivary nuclei nTPM: 185.1
2165
Male, age 80, both hemispheres
244.2
2130
Female, age 85, both hemispheres
242.2
2794
Female, age 91, left hemisphere
159.2
2023
Male, age 76, both hemispheres
94.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 148.1
2840
Female, age 85, both hemispheres
209.6
2449
Male, age 74, both hemispheres
203.2
2161
Male, age 80, both hemispheres
147.9
1959
Male, age 76, both hemispheres
144.4
2359
Male, age 61, both hemispheres
103.0
2456
Female, age 91, both hemispheres
80.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
726.4
Pig sample
Sample description
nTPM
Pons nTPM: 726.5
Samples: 4
Max nTPM: 1203.4
Min nTPM: 480.3
Sample A
Female
1203.4
Sample B
Female
480.3
Sample C
Male
556.7
Sample D
Male
665.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.