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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
123.5
nTPM
GTEx:
123.5
nTPM
FANTOM5:
343.1
Scaled Tags Per Million
Pig:
122.6
nTPM
Mouse:
87.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
123.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 123.5
Samples: 105
Max nTPM: 250.3
Min nTPM: 61.0
Std nTPM: 33.4
Median nTPM:
490_1
67 years, female
250.3
491_1
89 years, female
236.5
162_1
79 years, female
209.1
315_1
62 years, female
183.2
415_1
77 years, female
173.4
42_1
85 years, male
172.6
89_1
63 years, male
171.2
149_1
88 years, male
170.7
4_1
88 years, female
166.7
466_1
57 years, female
165.9
126_1
63 years, male
163.7
32_1
67 years, male
162.4
43_1
64 years, female
161.2
17_1
71 years, male
161.1
145_1
84 years, male
159.5
117_1
61 years, male
159.3
35_1
74 years, female
157.8
139_1
64 years, female
157.2
2_1
77 years, female
156.6
413_1
59 years, female
154.1
307_1
66 years, female
153.7
142_1
61 years, female
150.8
6_1
73 years, female
147.4
137_1
83 years, male
146.5
153_1
70 years, female
146.2
414_1
84 years, female
146.0
501_1
88 years, male
145.9
109_1
81 years, female
145.6
308_1
70 years, female
143.8
266_1
85 years, male
141.1
120_1
70 years, female
140.3
313_1
79 years, female
138.7
81_1
67 years, male
138.3
254_1
77 years, female
137.8
18_1
88 years, male
136.6
324_1
76 years, male
136.1
499_1
55 years, female
135.9
265_1
87 years, male
135.8
311_1
78 years, male
135.0
495_1
57 years, female
131.9
384_1
83 years, male
130.1
41_1
94 years, female
128.7
375_1
74 years, female
127.8
9_1
66 years, female
125.2
115_1
83 years, male
124.7
468_1
89 years, male
124.6
518_1
75 years, female
124.5
119_1
70 years, female
121.6
396_1
62 years, male
120.8
314_1
67 years, male
119.9
379_1
60 years, male
118.9
447_1
81 years, male
116.2
394_1
75 years, female
115.1
288_1
66 years, female
113.9
291_1
76 years, male
113.6
503_1
68 years, male
112.9
348_1
84 years, male
112.7
347_1
72 years, male
111.5
356_1
87 years, female
111.1
386_1
76 years, male
109.7
189_1
76 years, male
109.5
217_1
76 years, male
108.4
389_1
86 years, female
108.2
293_1
68 years, female
108.0
354_1
81 years, female
107.5
335_1
73 years, female
107.2
526_1
61 years, male
106.3
218_1
71 years, female
105.1
316_1
62 years, male
105.1
480_1
63 years, male
104.8
292_1
71 years, male
104.1
286_1
68 years, female
103.1
350_1
84 years, female
103.0
319_1
81 years, male
102.9
351_1
91 years, male
102.9
517_1
88 years, male
102.5
377_1
82 years, female
102.3
317_1
60 years, male
101.9
353_1
82 years, female
101.1
246_1
77 years, male
98.6
173_1
67 years, male
98.5
349_1
83 years, male
98.5
404_1
82 years, female
98.2
295_1
61 years, female
98.1
425_1
59 years, female
98.1
355_1
70 years, female
94.7
318_1
68 years, male
94.6
243_1
75 years, male
92.0
320_1
89 years, female
91.5
506_1
65 years, male
91.5
376_1
75 years, female
90.6
251_1
78 years, male
89.7
172_1
72 years, female
89.1
322_1
76 years, male
88.4
99_1
64 years, male
88.2
264_1
73 years, female
87.7
229_1
69 years, female
84.5
452_1
88 years, female
83.4
237_1
82 years, male
83.0
352_1
62 years, male
81.4
406_1
79 years, male
77.5
405_1
91 years, male
75.9
321_1
62 years, female
68.1
177_1
74 years, male
66.7
163_1
78 years, male
61.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
