HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:108.2 nTPM
HPA Brain:114.8 nTPM
GTEx:108.2 nTPM
FANTOM5:362.3 Scaled Tags Per Million
Pig:138.2 nTPM
Mouse:46.7 nTPM
Allen mouse:26.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041057Antibody HPA058707Antibody CAB011532
Glial cells MediumHighHigh
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 114.8
Sample id Sample description nTPM
Hippocampus
nTPM: 107.1
1898 Male, age 80, left hemisphere 117.5
1855 Male, age 76, left hemisphere 114.6
2529 Female, age 94, left hemisphere 112.9
1911 Female, age 85, right hemisphere 106.8
2148 Female, age 91, left hemisphere 96.7
2621 Female, age 67, right hemisphere 94.3
Dentate gyrus
nTPM: 102.2
2010 Male, age 76, both hemispheres 107.4
2528 Male, age 74, both hemispheres 106.9
2246 Female, age 85, both hemispheres 106.8
2530 Female, age 94, left hemisphere 105.1
1927 Female, age 91, both hemispheres 96.6
2531 Female, age 67, both hemispheres 90.6
Entorhinal gyrus
nTPM: 100.6
1938 Female, age 85, left hemisphere 120.1
2117 Female, age 91, right hemisphere 105.8
2686 Male, age 75, right hemisphere 102.3
2764 Male, age 80, right hemisphere 95.0
1787 Male, age 76, left hemisphere 91.6
2613 Female, age 94, left hemisphere 89.0
Hippocampus, CA1
nTPM: 114.8
2749 Male, age 80, left hemisphere 136.9
1873 Female, age 85, both hemispheres 123.5
2045 Male, age 76, both hemispheres 111.6
2527 Male, age 74, both hemispheres 110.0
2082 Female, age 91, right hemisphere 92.1
Hippocampus, CA2
nTPM: 103.9
1892 Male, age 76, both hemispheres 118.1
2249 Male, age 74, both hemispheres 112.9
1963 Male, age 80, left hemisphere 110.4
2113 Female, age 91, right hemisphere 98.5
1940 Female, age 85, left hemisphere 97.2
2437 Female, age 94, left hemisphere 86.3
Hippocampus, CA3
nTPM: 108.0
1867 Male, age 76, both hemispheres 139.8
2137 Male, age 80, left hemisphere 130.9
1891 Female, age 85, both hemispheres 103.9
2436 Male, age 74, both hemispheres 98.7
2620 Female, age 94, left hemisphere 90.9
2861 Female, age 67, both hemispheres 83.6
Parahippocampal cortex
nTPM: 101.2
1933 Female, age 85, both hemispheres 108.3
1850 Male, age 80, both hemispheres 107.3
2250 Female, age 67, right hemisphere 106.5
2532 Female, age 72, left hemisphere 106.4
2245 Female, age 91, both hemispheres 101.4
2018 Male, age 76, both hemispheres 100.0
2692 Male, age 74, both hemispheres 99.4
1990 Female, age 91, right hemisphere 97.1
2693 Female, age 94, both hemispheres 97.1
2622 Female, age 67, right hemisphere 88.9
Perirhinal gyrus
nTPM: 103.3
1841 Female, age 85, right hemisphere 120.6
1794 Male, age 80, right hemisphere 102.3
2521 Female, age 94, right hemisphere 101.2
1847 Female, age 91, left hemisphere 98.3
2848 Male, age 76, right hemisphere 94.1
Subiculum
nTPM: 106.9
2042 Male, age 76, both hemispheres 128.6
1977 Female, age 85, both hemispheres 117.9
1901 Male, age 80, both hemispheres 110.7
2729 Female, age 91, right hemisphere 98.9
2619 Male, age 74, both hemispheres 96.0
2438 Female, age 94, left hemisphere 89.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 108.2
GTEx sample id Sample description nTPM
96.6104.4118.169.2147.1020406080100120140160
Brain - Hippocampus
Average nTPM: 108.2
Samples: 197

Max nTPM: 167.3
Min nTPM: 69.2
Std nTPM: 16.8
Median nTPM: 104.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 167.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 157.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 155.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 152.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 152.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 151.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 147.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 143.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 140.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 139.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 138.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 362.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 362.3
FF:10153-102I9 76 years, female 397.4
FF:10169-103B7 60 years, female 327.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 138.2
Pig sample Sample description nTPM
128.0131.2140.5126.9134.0020406080100120140160
 		Subiculum
nTPM: 137.3
Samples: 4

Max nTPM: 160.1
Min nTPM: 126.9
Sample A Female 160.1
Sample B Female 134.0
Sample C Male 128.3
Sample D Male 126.9
132.0139.2145.3126.5147.8020406080100120140
 		Dorsal hippocampus
nTPM: 138.2
Samples: 4

Max nTPM: 147.8
Min nTPM: 126.5
Sample A Female 147.8
Sample B Female 133.8
Sample C Male 144.5
Sample D Male 126.5
118.4122.7129.5118.0137.60102030405060708090100110120130
 		Entorhinal cortex
nTPM: 125.3
Samples: 4

Max nTPM: 137.6
Min nTPM: 118.0
Sample A Female 126.8
Sample B Female 137.6
Sample C Male 118.6
Sample D Male 118.0
127.3128.6130.5123.2128.70102030405060708090100110120130
 		Ventral hippocampus
nTPM: 129.1
Samples: 4

Max nTPM: 135.9
Min nTPM: 123.2
Sample A Female 128.6
Sample B Female 123.2
Sample C Male 128.7
Sample D Male 135.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 46.7
Mouse sample Sample description nTPM
44.344.846.043.845.1051015202530354045
 		Entorhinal cortex
nTPM: 45.5
Samples: 4

Max nTPM: 48.5
Min nTPM: 43.8
Sample A Male 44.5
Sample B Male 45.1
Sample C Female 43.8
Sample D Female 48.5
42.446.550.741.352.505101520253035404550
 		Hippocampal formation
nTPM: 46.7
Samples: 4

Max nTPM: 52.5
Min nTPM: 41.3
Sample A Male 42.8
Sample B Male 52.5
Sample C Female 50.1
Sample D Female 41.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 26.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 26.3
386235 Antisense, RP_040804_01_C08, Mouse strain C57BL/6J (56 days, male) 26.3

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