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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
212.1
nTPM
FANTOM5:
213.2
Scaled Tags Per Million
Pig:
93.8
nTPM
Allen mouse:
9.1
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
212.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 176.5
2188
Female, age 91, both hemispheres
240.4
1984
Male, age 76, both hemispheres
181.4
2301
Female, age 85, both hemispheres
146.2
2090
Male, age 80, both hemispheres
138.0
Dorsal cochlear nucleus nTPM: 122.7
2187
Female, age 91, both hemispheres
161.9
2370
Male, age 61, both hemispheres
121.5
2378
Male, age 80, both hemispheres
113.9
2058
Male, age 76, both hemispheres
112.3
2802
Male, age 74, right hemisphere
104.1
Dorsal tegmental nucleus nTPM: 148.4
2083
Male, age 80, both hemispheres
190.5
2358
Male, age 61, both hemispheres
154.2
2326
Male, age 74, both hemispheres
136.4
1936
Male, age 76, left hemisphere
112.6
Dorsolateral tegmental area nTPM: 134.9
2654
Male, age 80, both hemispheres
172.6
2337
Male, age 61, both hemispheres
160.4
2751
Female, age 85, both hemispheres
142.4
2360
Male, age 74, both hemispheres
112.9
2141
Male, age 76, both hemispheres
86.2
Kolliker-Fuse nucleus nTPM: 178.0
2793
Female, age 91, left hemisphere
265.8
2163
Male, age 80, both hemispheres
180.2
2315
Male, age 76, right hemisphere
88.0
Lateral lemniscal nuclei nTPM: 212.1
2320
Female, age 91, left hemisphere
270.5
2036
Male, age 80, both hemispheres
220.7
2453
Male, age 74, right hemisphere
199.8
2746
Female, age 85, left hemisphere
198.2
2169
Male, age 76, both hemispheres
171.4
Lateral parabrachial nucleus nTPM: 167.6
2139
Female, age 85, right hemisphere
198.3
2013
Male, age 80, both hemispheres
178.8
2792
Male, age 76, both hemispheres
157.4
2790
Male, age 61, both hemispheres
136.0
Lateral vestibular nucleus nTPM: 142.8
2184
Male, age 76, both hemispheres
152.7
2311
Male, age 80, both hemispheres
132.9
Locus coeruleus nTPM: 177.5
2014
Male, age 55, unknown
225.8
2720
Male, age 74, both hemispheres
202.7
2788
Male, age 74, unknown
187.1
2317
Female, age 72, unknown
159.2
1980
Male, age 76, both hemispheres
157.2
2162
Male, age 80, both hemispheres
156.2
2123
Female, age 91, both hemispheres
154.7
Medial parabrachial nucleus nTPM: 162.5
2170
Female, age 91, both hemispheres
181.4
2463
Female, age 85, right hemisphere
175.2
2156
Male, age 61, both hemispheres
174.1
2854
Male, age 80, both hemispheres
154.5
2786
Male, age 76, both hemispheres
127.5
Medial periolivary nuclei nTPM: 194.0
2171
Female, age 85, both hemispheres
226.0
2458
Female, age 91, both hemispheres
216.3
2081
Male, age 80, both hemispheres
196.8
2791
Male, age 74, right hemisphere
178.1
2063
Male, age 76, both hemispheres
152.7
Motor facial nucleus nTPM: 170.0
2365
Male, age 74, right hemisphere
238.5
2697
Female, age 85, both hemispheres
183.3
2327
Male, age 80, both hemispheres
172.8
2062
Male, age 76, both hemispheres
161.2
2795
Female, age 91, both hemispheres
144.9
2126
Male, age 61, both hemispheres
119.5
Motor trigeminal nucleus nTPM: 176.9
2560
Male, age 74, both hemispheres
222.4
2321
Female, age 91, both hemispheres
191.0
2079
Male, age 80, both hemispheres
169.6
2335
Male, age 61, both hemispheres
156.1
2309
Male, age 76, both hemispheres
145.3
Nuclei of the trapezoid body nTPM: 172.5
2166
Male, age 80, both hemispheres
192.7
2368
Female, age 91, both hemispheres
181.1
2735
Female, age 85, both hemispheres
176.2
2159
Male, age 61, both hemispheres
162.3
1983
Male, age 76, both hemispheres
150.0
Nucleus raphe magnus nTPM: 193.3
2459
Female, age 91, both hemispheres
235.3
2328
Male, age 80, both hemispheres
205.2
2455
Male, age 74, both hemispheres
204.7
2172
Female, age 85, both hemispheres
192.6
2051
Male, age 76, both hemispheres
175.2
2160
Male, age 61, both hemispheres
147.0
Paramedian reticular nucleus nTPM: 142.2
2050
Female, age 85, both hemispheres
175.2
2057
Male, age 80, both hemispheres
144.0
2313
Male, age 61, both hemispheres
129.6
2052
Male, age 76, both hemispheres
119.8
Pedunculopontine tegmental nucleus nTPM: 161.0
2334
Male, age 80, both hemispheres
169.3
1921
Female, age 85, both hemispheres
162.1
2338
Male, age 61, both hemispheres
151.5
Pontine nuclei nTPM: 207.4
2454
Male, age 74, left hemisphere
345.4
2319
Female, age 91, both hemispheres
248.3
2787
Female, age 85, both hemispheres
214.2
2115
Male, age 80, left hemisphere
209.5
1968
Male, age 76, left hemisphere
176.0
2727
Male, age 61, right hemisphere
161.7
1863
Male, age 55, unknown
157.0
2109
Female, age 72, unknown
146.8
Pontine raphe nucleus nTPM: 134.1
2122
Female, age 85, midline
153.8
2853
Male, age 76, midline
114.3
Posteroventral cochlear nucleus nTPM: 174.9
2135
Female, age 91, both hemispheres
245.8
2070
Male, age 76, both hemispheres
164.4
2752
Female, age 85, both hemispheres
163.4
2341
Male, age 80, both hemispheres
157.5
2371
Male, age 61, both hemispheres
143.5
Principal sensory trigeminal nucleus nTPM: 173.6
2367
Female, age 91, left hemisphere
249.2
2008
Male, age 80, left hemisphere
151.6
2324
Male, age 76, both hemispheres
148.6
2158
Male, age 61, both hemispheres
144.9
Reticular pontine nucleus, caudal nTPM: 195.9
2457
Female, age 91, both hemispheres
251.0
2332
Male, age 80, right hemisphere
194.9
2559
Male, age 74, both hemispheres
179.8
2092
Male, age 76, both hemispheres
158.0
Reticular pontine nucleus, oral nTPM: 210.7
2366
Female, age 91, both hemispheres
312.1
2361
Male, age 74, both hemispheres
242.5
1939
Male, age 80, both hemispheres
171.4
2012
Female, age 85, both hemispheres
170.8
2167
Male, age 76, both hemispheres
156.9
Reticulotegmental nucleus nTPM: 168.3
2322
Female, age 91, both hemispheres
196.0
2333
Male, age 80, both hemispheres
179.4
2452
Male, age 74, both hemispheres
167.3
2325
Male, age 76, both hemispheres
130.7
Spinal trigeminal nucleus, oral nTPM: 162.0
2737
Female, age 85, both hemispheres
198.7
2164
Male, age 80, both hemispheres
144.0
1978
Male, age 76, both hemispheres
143.4
Subcoeruleus area nTPM: 146.5
2369
Female, age 85, left hemisphere
159.2
1958
Male, age 80, both hemispheres
150.8
2089
Male, age 76, left hemisphere
145.6
2323
Female, age 91, left hemisphere
143.9
2451
Male, age 74, both hemispheres
132.9
Superior olive nTPM: 193.6
2364
Male, age 74, right hemisphere
214.5
2561
Female, age 91, both hemispheres
198.8
2329
Male, age 80, right hemisphere
197.3
1875
Female, age 85, both hemispheres
190.6
2020
Male, age 76, both hemispheres
166.7
Ventral periolivary nuclei nTPM: 176.2
2130
Female, age 85, both hemispheres
195.0
2165
Male, age 80, both hemispheres
180.6
2023
Male, age 76, both hemispheres
177.2
2794
Female, age 91, left hemisphere
152.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 187.3
2449
Male, age 74, both hemispheres
220.7
2456
Female, age 91, both hemispheres
216.8
2161
Male, age 80, both hemispheres
193.8
2359
Male, age 61, both hemispheres
172.7
2840
Female, age 85, both hemispheres
164.0
1959
Male, age 76, both hemispheres
156.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
93.8
Pig sample
Sample description
nTPM
Pons nTPM: 93.8
Samples: 4
Max nTPM: 200.0
Min nTPM: 47.6
Sample A
Female
200.0
Sample B
Female
47.6
Sample C
Male
57.5
Sample D
Male
70.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.