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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
49.0
nTPM
HPA Brain:
206.0
nTPM
GTEx:
49.0
nTPM
FANTOM5:
377.6
Scaled Tags Per Million
Pig:
106.2
nTPM
Mouse:
81.2
nTPM
Allen mouse:
11.1
Expression energy
MIDBRAIN - Annotated protein expression
Pending normal tissue analysis
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
206.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 148.8
2019
Male, age 18, unknown
323.9
2411
Female, age 72, unknown
162.1
2219
Male, age 76, both hemispheres
148.5
1833
Male, age 53, unknown
140.5
2828
Female, age 72, unknown
132.5
1830
Male, age 51, unknown
130.0
1827
Male, age 72, unknown
122.9
2666
Male, age 74, left hemisphere
118.4
1870
Female, age 42, unknown
113.1
2586
Male, age 75, left hemisphere
96.5
Dorsal raphe nucleus nTPM: 98.0
2750
Male, age 76, both hemispheres
156.7
2298
Female, age 72, unknown
96.7
1828
Male, age 53, unknown
83.9
2016
Female, age 72, unknown
78.6
2047
Male, age 72, unknown
74.2
Inferior colliculus nTPM: 105.1
1848
Female, age 42, unknown
116.5
2097
Female, age 72, unknown
108.8
1890
Male, age 53, unknown
103.9
2849
Male, age 72, unknown
91.0
Median raphe nucleus nTPM: 86.6
2220
Male, age 76, midline
86.6
Periaquaductal grey, anterior nTPM: 82.9
1947
Male, age 18, unknown
100.3
1795
Male, age 51, unknown
86.6
2502
Female, age 75, unknown
61.9
Periaquaductal grey, dorsal nTPM: 95.9
2464
Female, age 72, unknown
116.1
1831
Male, age 72, unknown
112.7
1840
Male, age 53, unknown
84.8
2850
Male, age 76, both hemispheres
70.0
Periaquaductal grey, lateral nTPM: 93.5
2272
Male, age 74, both hemispheres
128.0
2053
Male, age 18, unknown
82.0
2140
Male, age 76, both hemispheres
70.5
Pretectal area nTPM: 206.0
2007
Male, age 72, unknown
332.1
1817
Female, age 42, unknown
322.7
1944
Female, age 72, unknown
314.2
1815
Male, age 53, unknown
300.2
1816
Male, age 51, unknown
295.7
2667
Female, age 75, unknown
157.5
2407
Male, age 75, both hemispheres
133.7
2316
Male, age 76, right hemisphere
132.8
2273
Male, age 74, both hemispheres
109.2
2224
Female, age 72, unknown
97.4
2825
Male, age 18, unknown
70.5
Red nucleus nTPM: 163.9
2785
Male, age 18, unknown
322.5
2503
Female, age 72, unknown
191.1
2823
Male, age 76, right hemisphere
185.1
1904
Male, age 53, unknown
167.2
1865
Male, age 51, unknown
156.5
2725
Female, age 75, unknown
153.1
2588
Male, age 74, left hemisphere
142.6
2227
Male, age 72, unknown
132.2
1954
Female, age 42, unknown
131.1
2769
Male, age 72, unknown
130.9
1821
Female, age 72, unknown
128.8
2584
Male, age 75, left hemisphere
125.6
Substantia nigra nTPM: 101.6
1889
Female, age 72, unknown
222.4
2583
Male, age 75, right hemisphere
130.9
2409
Female, age 72, unknown
130.2
2590
Female, age 75, unknown
110.4
1941
Male, age 53, unknown
108.2
1851
Male, age 51, unknown
83.9
2665
Male, age 74, both hemispheres
68.3
2241
Male, age 72, unknown
66.7
1916
Female, age 42, unknown
57.0
2699
Male, age 18, unknown
38.2
Superior colliculus nTPM: 173.0
2087
Female, age 72, unknown
249.8
1995
Male, age 72, unknown
237.5
1913
Female, age 42, unknown
236.0
2668
Female, age 75, unknown
205.1
2261
Male, age 18, unknown
183.4
1895
Male, age 76, right hemisphere
174.2
2587
Male, age 74, left hemisphere
140.1
1796
Male, age 53, unknown
124.0
1839
Male, age 51, unknown
114.5
2664
Male, age 75, both hemispheres
65.9
Ventral tegmental area nTPM: 95.9
2410
Female, age 72, unknown
141.0
2223
Female, age 72, unknown
104.7
2218
Male, age 76, both hemispheres
97.5
1942
Male, age 51, unknown
88.6
2021
Male, age 53, unknown
71.9
1915
Female, age 42, unknown
71.8
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
49.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 49.0
Samples: 139
Max nTPM: 149.0
Min nTPM: 18.2
Std nTPM: 23.6
Median nTPM: 41.4
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
149.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
140.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
117.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
115.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
113.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
108.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
101.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
94.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
89.3
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
89.0
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
83.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
81.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
81.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
79.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
78.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
78.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
76.7
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
74.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
74.6
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
72.0
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
69.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
69.4
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
69.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
68.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
67.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
66.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
65.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
63.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
63.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
62.9
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
62.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
61.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
59.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
57.9
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
57.9
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
55.4
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
55.3
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
54.9
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
54.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
54.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
53.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
53.2
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
53.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
52.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
52.6
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
52.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
51.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
50.1
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
49.8
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
49.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
49.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
49.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
48.9
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
48.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
47.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
47.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
47.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
46.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
46.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
45.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
45.0
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
44.8
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
44.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
44.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
43.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
42.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
42.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
41.9
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
41.8
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
41.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
41.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
41.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
41.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
40.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
40.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
40.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
40.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
40.6
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
40.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
39.8
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
39.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
39.8
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
39.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
39.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
38.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
38.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
38.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
38.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
38.3
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
38.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
37.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
37.6
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
36.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
36.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
36.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
36.3
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
36.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
35.3
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
35.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
34.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
34.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
34.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
34.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
34.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
33.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
33.2
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
33.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
32.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
32.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
32.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
31.9
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
30.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
30.1
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
29.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
29.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
29.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
28.9
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
28.9
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
28.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
27.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
27.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
27.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
26.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
26.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
25.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
25.8
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
25.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
25.1
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
25.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
24.8
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
24.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
24.4
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
23.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
23.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
21.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
20.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
20.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
19.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
18.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
81.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 81.2
Samples: 4
Max nTPM: 90.5
Min nTPM: 75.3
Sample A
Male
75.3
Sample B
Male
80.7
Sample C
Female
90.5
Sample D
Female
78.4
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.