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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
54.0
nTPM
HPA Brain:
169.5
nTPM
GTEx:
54.0
nTPM
FANTOM5:
182.2
Scaled Tags Per Million
Pig:
63.6
nTPM
Mouse:
93.5
nTPM
Allen mouse:
17.0
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
169.5
Sample id
Sample description
nTPM
Amygdala nTPM: 169.5
2814
Male, age 76, right hemisphere
335.6
2695
Female, age 67, right hemisphere
147.7
2514
Male, age 75, right hemisphere
137.0
2517
Female, age 94, left hemisphere
129.3
1987
Female, age 91, left hemisphere
97.8
Basal amygdala nTPM: 121.1
1955
Male, age 76, both hemispheres
227.2
2685
Female, age 94, left hemisphere
128.4
2110
Male, age 80, left hemisphere
101.8
2243
Female, age 91, right hemisphere
96.1
2827
Female, age 67, right hemisphere
88.0
2609
Male, age 75, right hemisphere
84.8
Central amygdala nTPM: 144.0
1905
Male, age 76, both hemispheres
287.6
2826
Female, age 94, left hemisphere
125.8
2239
Male, age 80, left hemisphere
111.7
2701
Female, age 91, right hemisphere
101.6
2515
Male, age 75, right hemisphere
93.2
Corticomedial amygdala nTPM: 117.6
2240
Male, age 76, both hemispheres
203.1
2429
Female, age 94, left hemisphere
119.8
2535
Female, age 67, right hemisphere
119.4
2242
Female, age 91, right hemisphere
103.1
2428
Male, age 75, right hemisphere
83.8
2829
Male, age 80, left hemisphere
76.5
Lateral amygdala nTPM: 143.8
1883
Male, age 76, both hemispheres
260.4
2534
Female, age 94, left hemisphere
184.5
2516
Male, age 75, right hemisphere
124.3
2256
Male, age 80, left hemisphere
112.2
2255
Female, age 91, right hemisphere
100.2
2830
Female, age 67, right hemisphere
81.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
54.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 54.0
Samples: 152
Max nTPM: 144.9
Min nTPM: 5.2
Std nTPM: 19.8
Median nTPM: 51.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
144.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
131.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
123.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
95.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
94.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
94.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
90.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
89.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
83.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
82.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
81.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
81.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
80.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
80.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
77.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
75.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
75.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
75.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
75.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
74.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
74.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
74.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
73.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
70.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
70.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
69.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
69.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
68.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
68.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
67.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
67.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
66.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
66.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
66.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
65.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
65.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
65.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
65.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
64.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
63.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
63.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
62.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
61.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
60.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
60.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
60.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
59.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
59.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
58.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
58.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
57.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
57.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
57.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
56.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
56.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
55.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
55.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
55.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
55.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
54.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
54.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
54.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
54.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
54.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
53.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
53.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
53.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
53.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
52.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
52.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
52.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
52.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
52.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
52.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
51.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
51.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
51.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
51.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
51.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
50.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
50.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
50.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
50.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
50.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
49.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
47.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
47.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
47.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
46.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
46.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
46.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
46.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
46.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
46.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
46.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
46.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
45.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
45.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
44.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
44.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
44.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
44.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
44.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
44.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
44.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
43.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
43.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
43.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
43.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
43.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
42.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
42.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
42.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
42.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
41.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
41.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
41.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
40.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
40.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
40.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
40.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
39.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
39.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
38.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
38.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
37.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
37.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
37.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
36.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
35.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
35.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
34.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
34.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
34.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
33.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
33.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
32.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
32.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
32.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
31.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
31.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
29.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
29.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
28.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
28.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
28.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
25.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
23.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
23.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
22.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
22.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
5.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
93.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 93.6
Samples: 4
Max nTPM: 111.9
Min nTPM: 86.5
Sample A
Male
111.9
Sample B
Male
86.5
Sample C
Female
87.3
Sample D
Female
88.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.