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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EPS8 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: 1.63
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
0.14
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
47%
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
49%
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
77.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
67.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
55.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
52.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
44.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
43.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
42.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
39.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
38.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
34.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
34.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
30.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
29.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
28.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
27.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
27.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
26.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
26.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
26.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
25.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
24.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
23.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
23.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
22.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
22.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
22.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
22.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
21.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
21.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
21.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
21.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
20.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
20.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
20.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
20.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
20.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
20.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
20.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
19.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
19.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
19.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
19.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
19.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
19.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
19.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
19.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
18.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
18.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
18.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
18.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
18.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
18.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
18.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
18.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
17.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
17.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
17.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
17.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
17.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
17.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
17.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
17.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
17.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
17.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
16.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
16.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
16.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
16.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
16.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
16.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
16.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
15.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
15.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
15.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
15.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
15.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
15.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
15.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
15.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
14.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
14.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
14.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
14.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
14.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
14.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
14.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
14.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
14.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
14.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
14.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
14.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
14.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
14.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
14.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
14.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
14.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
14.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
14.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
14.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
13.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
13.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
13.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
13.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
13.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
13.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
13.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
13.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
13.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
13.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
13.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
13.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
13.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
12.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
12.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
12.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
12.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
12.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
12.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
12.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
12.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
12.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
12.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
12.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
12.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
12.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
12.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
12.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
12.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
11.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
11.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
11.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
11.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
11.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
11.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
11.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
11.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
11.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
11.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
11.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
11.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
11.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
10.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
10.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
10.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
10.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
10.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
10.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
10.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
10.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
10.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
9.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
9.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
9.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
9.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
9.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
9.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
9.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
9.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
9.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
9.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
9.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
9.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
9.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
9.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
8.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
8.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
8.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
8.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
8.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
8.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
8.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
8.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
8.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
8.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
8.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
8.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
7.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
7.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
7.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
7.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
7.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
7.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
7.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
7.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
7.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
7.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
7.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
7.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
7.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
7.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
7.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
7.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
7.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
7.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
7.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
6.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
6.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
6.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
6.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
6.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
6.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
6.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
6.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
6.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
6.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
6.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
6.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
5.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
5.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
5.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
5.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
5.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
5.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
5.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
5.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
5.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
5.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
4.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
4.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
4.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
4.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
4.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
4.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
4.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
4.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
4.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
4.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
4.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
4.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
4.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
4.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
4.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
3.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
3.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
3.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
3.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
3.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
3.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
3.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
3.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
3.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
3.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
3.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
3.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
3.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
3.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
3.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
2.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
2.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
2.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
2.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
2.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
2.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
2.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
2.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
2.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
2.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
2.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
2.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
2.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
1.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
1.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
1.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
1.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
1.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
1.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
1.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
0.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
0.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
0.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
0.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
0.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
0.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
0.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
0.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
0.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
0.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
0.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
0.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
0.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
0.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
0.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
0.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
0.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
0.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
0.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
0.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
0.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
0.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
0.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
0.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
0.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
0.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
0.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EPS8 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: 2.14
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
0.068
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
57%
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
0%
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.5
Number of samples
231
Samples
Sample
Description
TPM
DO45245
0 years, female, NA, stage:2, dead, 240 days
227.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
79.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
58.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
51.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
51.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
39.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
38.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
38.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
38.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
38.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
36.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
33.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
32.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
32.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
32.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
32.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
30.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
29.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
27.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
27.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
26.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
26.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
25.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
25.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
25.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
25.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
25.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
24.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
22.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
22.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
22.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
21.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
21.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
21.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
21.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
21.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
21.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
21.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
21.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
21.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
21.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
20.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
20.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
20.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
20.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
20.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
20.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
20.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
20.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
20.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
20.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
20.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
20.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
20.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
19.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
19.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
19.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
18.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
18.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
18.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
18.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
18.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
18.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
18.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
18.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
17.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
17.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
17.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
17.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
17.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
17.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
17.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
17.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
17.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
17.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
17.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
17.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
17.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
17.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
16.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
16.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
16.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
16.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
16.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
15.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
15.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
15.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
15.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
15.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
15.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
15.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
15.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
15.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
15.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
15.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
15.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
15.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
15.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
14.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
14.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
14.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
14.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
14.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
14.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
14.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
14.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
14.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
14.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
14.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
14.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
13.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
13.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
13.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
13.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
13.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
13.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
13.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
13.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
13.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
13.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
13.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
13.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
13.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
13.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
13.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
12.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
12.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
12.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
12.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
12.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
12.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
12.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
12.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
12.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
12.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
12.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
12.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
12.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
12.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
12.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
12.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
12.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
12.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
12.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
12.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
12.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
11.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
11.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
11.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
11.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
11.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
11.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
11.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
11.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
11.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
11.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
11.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
11.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
11.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
11.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
11.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
10.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
10.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
10.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
10.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
10.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
10.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
10.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
10.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
10.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
10.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
10.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
10.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
10.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
9.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
9.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
9.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
9.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
9.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
9.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
9.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
9.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
9.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
9.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
9.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
9.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
8.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
8.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
8.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
8.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
8.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
8.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
8.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
8.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
8.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
8.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
8.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
8.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
8.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
7.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
7.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
7.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
7.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
7.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
7.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
7.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
7.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
7.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
6.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
6.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
6.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
6.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
6.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
6.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
5.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
5.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
5.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
5.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
5.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
4.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
4.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
3.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
3.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
2.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
2.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
211
Tumor
1.3
311
Tumor
0.8
697
Tumor
0.7
573
Tumor
0.7
493
Tumor
0.6
937
Tumor
0.6
951
Tumor
0.6
513
Tumor
0.6
498
Normal
0.6
413
Tumor
0.5
563
Tumor
0.5
917
Tumor
0.5
477
Tumor
0.5
567
Tumor
0.5
478
Normal
0.5
231
Tumor
0.5
695
Tumor
0.5
954
Normal
0.5
355
Tumor
0.5
553
Tumor
0.5
851
Tumor
0.4
444
Normal
0.4
268
Normal
0.4
672
Normal
0.4
536
Normal
0.4
421
Tumor
0.4
344
Normal
0.4
135
Tumor
0.4
411
Tumor
0.4
538
Normal
0.4
375
Tumor
0.4
112
Tumor
0.4
465
Tumor
0.4
943
Tumor
0.3
957
Tumor
0.3
471
Tumor
0.3
865
Tumor
0.3
975
Tumor
0.3
431
Tumor
0.3
492
Normal
0.3
192
Normal
0.3
137
Tumor
0.3
916
Normal
0.3
443
Tumor
0.3
923
Tumor
0.3
467
Tumor
0.3
357
Tumor
0.3
415
Tumor
0.3
967
Tumor
0.3
423
Tumor
0.3
127
Tumor
0.3
983
Tumor
0.3
741
Tumor
0.3
525
Tumor
0.3
384
Normal
0.3
873
Tumor
0.3
524
Normal
0.3
883
Tumor
0.3
925
Tumor
0.2
878
Normal
0.2
1013
Tumor
0.2
455
Tumor
0.2
641
Tumor
0.2
545
Tumor
0.2
395
Tumor
0.2
1028
Normal
0.2
388
Normal
0.2
195
Tumor
0.2
473
Tumor
0.2
1015
Tumor
0.2
867
Tumor
0.2
647
Tumor
0.2
924
Normal
0.2
1045
Tumor
0.2
191
Tumor
0.2
721
Tumor
0.2
383
Tumor
0.2
213
Tumor
0.2
671
Tumor
0.2
367
Tumor
0.2
572
Normal
0.2
488
Normal
0.2
817
Tumor
0.2
261
Tumor
0.2
392
Normal
0.2
124
Normal
0.2
958
Normal
0.2
686
Normal
0.2
224
Normal
0.2
744
Normal
0.2
984
Normal
0.2
434
Normal
0.2
976
Normal
0.2
331
Tumor
0.2
352
Normal
0.2
145
Tumor
0.2
185
Tumor
0.2
394
Normal
0.2
1014
Normal
0.2
484
Normal
0.2
113
Tumor
0.2
615
Tumor
0.2
1044
Normal
0.2
665
Tumor
0.2
535
Tumor
0.1
852
Normal
0.1
713
Tumor
0.1
433
Tumor
0.1
387
Tumor
0.1
568
Normal
0.1
666
Normal
0.1
963
Tumor
0.1
297
Tumor
0.1
857
Tumor
0.1
456
Normal
0.1
636
Normal
0.1
755
Tumor
0.1
814
Normal
0.1
354
Normal
0.1
364
Normal
0.1
128
Normal
0.1
368
Normal
0.1
448
Normal
0.1
142
Normal
0.1
922
Normal
0.1
187
Tumor
0.1
446
Normal
0.1
874
Normal
0.1
527
Tumor
0.1
396
Normal
0.1
386
Normal
0.1
267
Tumor
0.1
918
Normal
0.1
284
Normal
0.1
361
Tumor
0.1
141
Tumor
0.1
785
Tumor
0.1
1046
Normal
0.1
571
Tumor
0.1
468
Normal
0.1
332
Normal
0.1
786
Normal
0.1
1041
Tumor
0.1
412
Normal
0.1
365
Tumor
0.1
915
Tumor
0.1
546
Normal
0.1
964
Normal
0.1
912
Normal
0.1
663
Tumor
0.1
1032
Normal
0.1
722
Normal
0.1
696
Normal
0.1
944
Normal
0.1
564
Normal
0.1
271
Tumor
0.1
451
Tumor
0.1
823
Tumor
0.1
445
Tumor
0.1
111
Normal
0.1
698
Normal
0.1
956
Normal
0.1
376
Normal
0.1
356
Normal
0.1
262
Normal
0.1
217
Tumor
0.1
426
Normal
0.1
285
Tumor
0.0
868
Normal
0.0
146
Normal
0.0
516
Normal
0.0
881
Tumor
0.0
126
Normal
0.0
328
Normal
0.0
422
Normal
0.0
574
Normal
0.0
188
Normal
0.0
642
Normal
0.0
221
Tumor
0.0
313
Tumor
0.0
554
Normal
0.0
416
Normal
0.0
474
Normal
0.0
965
Tumor
0.0
432
Normal
0.0
664
Normal
0.0
866
Normal
0.0
743
Tumor
0.0
353
Tumor
0.0
131
Tumor
0.0
342
Normal
0.0
982
Normal
0.0
978
Normal
0.0
716
Normal
0.0
884
Normal
0.0
494
Normal
0.0
461
Tumor
0.0
482
Normal
0.0
756
Normal
0.0
497
Tumor
0.0
714
Normal
0.0
452
Normal
0.0
341
Tumor
0.0
528
Normal
0.0
232
Normal
0.0
778
Normal
0.0
952
Normal
0.0
447
Tumor
0.0
466
Normal
0.0
483
Tumor
0.0
132
Normal
0.0
723
Tumor
0.0
272
Normal
0.0
938
Normal
0.0
1042
Normal
0.0
981
Tumor
0.0
1025
Tumor
0.0
148
Normal
0.0
914
Normal
0.0
228
Normal
0.0
1021
Tumor
0.0
161
Tumor
0.0
424
Normal
0.0
627
Tumor
0.0
391
Tumor
0.0
212
Normal
0.0
258
Normal
0.0
186
Normal
0.0
968
Normal
0.0
1016
Normal
0.0
214
Normal
0.0
464
Normal
0.0
882
Normal
0.0
515
Tumor
0.0
926
Normal
0.0
746
Normal
0.0
343
Tumor
0.0
472
Normal
0.0
742
Normal
0.0
362
Normal
0.0
921
Tumor
0.0
196
Normal
0.0
862
Normal
0.0
286
Normal
0.0
955
Tumor
0.0
685
Tumor
0.0
864
Normal
-0.1
737
Tumor
-0.1
481
Tumor
-0.1
218
Normal
-0.1
436
Normal
-0.1
618
Normal
-0.1
138
Normal
-0.1
1026
Normal
-0.1
1022
Normal
-0.1
277
Tumor
-0.1
414
Normal
-0.1
966
Normal
-0.1
816
Normal
-0.1
813
Tumor
-0.1
172
Normal
-0.1
114
Normal
-0.1
278
Normal
-0.1
298
Normal
-0.1
662
Normal
-0.1
162
Normal
-0.1
534
Normal
-0.1
628
Normal
-0.1
616
Normal
-0.1
462
Normal
-0.1
514
Normal
-0.1
312
Normal
-0.1
136
Normal
-0.1
314
Normal
-0.1
393
Tumor
-0.1
283
Tumor
-0.1
523
Tumor
-0.1
366
Normal
-0.1
487
Tumor
-0.1
526
Normal
-0.1
491
Tumor
-0.1
427
Tumor
-0.1
223
Tumor
-0.1
463
Tumor
-0.1
818
Normal
-0.1
537
Tumor
-0.1
728
Normal
-0.1
648
Normal
-0.1
327
Tumor
-0.1
724
Normal
-0.1
738
Normal
-0.1
428
Normal
-0.2
617
Tumor
-0.2
863
Tumor
-0.2
222
Normal
-0.2
358
Normal
-0.2
824
Normal
-0.2
351
Tumor
-0.2
877
Tumor
-0.2
227
Tumor
-0.2
911
Tumor
-0.2
858
Normal
-0.2
518
Normal
-0.2
745
Tumor
-0.2
557
Tumor
-0.2
715
Tumor
-0.2
861
Tumor
-0.2
777
Tumor
-0.2
147
Tumor
-0.2
815
Tumor
-0.2
1027
Tumor
-0.3
558
Normal
-0.3
171
Tumor
-0.3
977
Tumor
-0.3
1043
Tumor
-0.3
363
Tumor
-0.3
661
Tumor
-0.4
425
Tumor
-0.4
953
Tumor
-0.4
913
Tumor
-0.4
517
Tumor
-0.4
257
Tumor
-0.4
385
Tumor
-0.5
1031
Tumor
-0.5
435
Tumor
-0.5
727
Tumor
-0.6
123
Tumor
-0.6
533
Tumor
-0.6
125
Tumor
-0.7
635
Tumor
-1.0
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.