HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:3.5 nTPM
HPA Brain:15.2 nTPM
GTEx:3.5 nTPM
FANTOM5:14.1 Scaled Tags Per Million
Pig:8.9 nTPM
Mouse:1.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036560Antibody HPA036561
Glial cells Not detectedLow
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 15.2
Sample id Sample description nTPM
Hippocampus
nTPM: 14.8
1911 Female, age 85, right hemisphere 16.0
1855 Male, age 76, left hemisphere 15.7
2529 Female, age 94, left hemisphere 14.9
1898 Male, age 80, left hemisphere 14.7
2621 Female, age 67, right hemisphere 13.9
2148 Female, age 91, left hemisphere 13.4
Dentate gyrus
nTPM: 14.9
2530 Female, age 94, left hemisphere 17.1
1927 Female, age 91, both hemispheres 15.9
2010 Male, age 76, both hemispheres 15.7
2246 Female, age 85, both hemispheres 14.4
2528 Male, age 74, both hemispheres 13.8
2531 Female, age 67, both hemispheres 12.3
Entorhinal gyrus
nTPM: 14.9
1938 Female, age 85, left hemisphere 16.2
2686 Male, age 75, right hemisphere 15.1
2613 Female, age 94, left hemisphere 15.0
2117 Female, age 91, right hemisphere 14.6
2764 Male, age 80, right hemisphere 14.6
1787 Male, age 76, left hemisphere 14.0
Hippocampus, CA1
nTPM: 15.2
2045 Male, age 76, both hemispheres 20.7
1873 Female, age 85, both hemispheres 14.8
2082 Female, age 91, right hemisphere 14.3
2749 Male, age 80, left hemisphere 13.4
2527 Male, age 74, both hemispheres 12.8
Hippocampus, CA2
nTPM: 14.5
1940 Female, age 85, left hemisphere 15.8
2113 Female, age 91, right hemisphere 14.9
1892 Male, age 76, both hemispheres 14.7
2249 Male, age 74, both hemispheres 13.9
1963 Male, age 80, left hemisphere 13.8
2437 Female, age 94, left hemisphere 13.8
Hippocampus, CA3
nTPM: 14.6
1891 Female, age 85, both hemispheres 16.2
1867 Male, age 76, both hemispheres 15.6
2861 Female, age 67, both hemispheres 15.6
2137 Male, age 80, left hemisphere 14.2
2620 Female, age 94, left hemisphere 13.1
2436 Male, age 74, both hemispheres 13.0
Parahippocampal cortex
nTPM: 14.8
2693 Female, age 94, both hemispheres 17.0
1850 Male, age 80, both hemispheres 16.7
1933 Female, age 85, both hemispheres 16.6
2532 Female, age 72, left hemisphere 15.3
2250 Female, age 67, right hemisphere 15.2
2018 Male, age 76, both hemispheres 15.0
2245 Female, age 91, both hemispheres 14.2
1990 Female, age 91, right hemisphere 13.2
2692 Male, age 74, both hemispheres 12.8
2622 Female, age 67, right hemisphere 12.2
Perirhinal gyrus
nTPM: 14.7
2848 Male, age 76, right hemisphere 16.9
1794 Male, age 80, right hemisphere 16.2
1841 Female, age 85, right hemisphere 14.3
1847 Female, age 91, left hemisphere 13.3
2521 Female, age 94, right hemisphere 12.8
Subiculum
nTPM: 14.5
2438 Female, age 94, left hemisphere 16.9
2729 Female, age 91, right hemisphere 16.1
1977 Female, age 85, both hemispheres 14.1
2042 Male, age 76, both hemispheres 14.1
1901 Male, age 80, both hemispheres 13.6
2619 Male, age 74, both hemispheres 12.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.5
Samples: 197

Max nTPM: 6.0
Min nTPM: 1.0
Std nTPM: 0.7
Median nTPM: 3.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 6.0
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 5.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 5.7
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 5.6
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 5.2
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 5.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 5.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 5.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 5.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 4.9
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 4.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 14.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.1
FF:10169-103B7 60 years, female 15.5
FF:10153-102I9 76 years, female 12.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 8.9
Pig sample Sample description nTPM
Subiculum
nTPM: 8.6
Samples: 4

Max nTPM: 9.0
Min nTPM: 8.0
Sample A Female 8.0
Sample B Female 8.7
Sample C Male 8.7
Sample D Male 9.0
Dorsal hippocampus
nTPM: 8.1
Samples: 4

Max nTPM: 9.3
Min nTPM: 6.8
Sample A Female 6.8
Sample B Female 8.8
Sample C Male 7.4
Sample D Male 9.3
Entorhinal cortex
nTPM: 8.9
Samples: 4

Max nTPM: 11.4
Min nTPM: 7.4
Sample A Female 7.4
Sample B Female 11.4
Sample C Male 8.8
Sample D Male 7.9
Ventral hippocampus
nTPM: 7.4
Samples: 4

Max nTPM: 8.3
Min nTPM: 6.8
Sample A Female 8.3
Sample B Female 7.5
Sample C Male 6.8
Sample D Male 6.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.8
Samples: 4

Max nTPM: 2.0
Min nTPM: 1.6
Sample A Male 1.8
Sample B Male 2.0
Sample C Female 1.6
Sample D Female 1.8
Hippocampal formation
nTPM: 1.7
Samples: 4

Max nTPM: 2.1
Min nTPM: 1.4
Sample A Male 1.4
Sample B Male 1.9
Sample C Female 1.4
Sample D Female 2.1

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