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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
450.7
nTPM
GTEx:
450.7
nTPM
FANTOM5:
833.2
Scaled Tags Per Million
Pig:
583.5
nTPM
Mouse:
3942.0
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
450.7
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 450.7
Samples: 105
Max nTPM: 1318.6
Min nTPM: 89.5
Std nTPM: 219.3
Median nTPM:
218_1
71 years, female
1318.6
386_1
76 years, male
972.1
353_1
82 years, female
954.1
452_1
88 years, female
892.7
351_1
91 years, male
810.5
322_1
76 years, male
802.2
379_1
60 years, male
764.9
173_1
67 years, male
764.7
354_1
81 years, female
745.5
295_1
61 years, female
742.9
319_1
81 years, male
726.1
506_1
65 years, male
723.3
350_1
84 years, female
714.0
377_1
82 years, female
708.8
163_1
78 years, male
707.9
6_1
73 years, female
693.4
318_1
68 years, male
688.6
447_1
81 years, male
688.1
321_1
62 years, female
659.1
41_1
94 years, female
655.7
320_1
89 years, female
655.7
384_1
83 years, male
628.6
243_1
75 years, male
615.4
356_1
87 years, female
597.8
237_1
82 years, male
594.6
317_1
60 years, male
586.9
316_1
62 years, male
584.7
375_1
74 years, female
583.1
347_1
72 years, male
569.2
293_1
68 years, female
554.7
348_1
84 years, male
553.9
145_1
84 years, male
549.7
355_1
70 years, female
544.1
352_1
62 years, male
542.9
307_1
66 years, female
537.7
349_1
83 years, male
536.0
291_1
76 years, male
530.0
4_1
88 years, female
528.6
376_1
75 years, female
523.2
2_1
77 years, female
510.3
177_1
74 years, male
498.3
17_1
71 years, male
494.3
335_1
73 years, female
487.8
264_1
73 years, female
465.5
172_1
72 years, female
451.3
311_1
78 years, male
448.7
120_1
70 years, female
447.3
292_1
71 years, male
446.3
35_1
74 years, female
434.5
404_1
82 years, female
432.1
425_1
59 years, female
430.1
18_1
88 years, male
415.3
308_1
70 years, female
409.5
503_1
68 years, male
403.5
518_1
75 years, female
403.1
137_1
83 years, male
401.8
99_1
64 years, male
392.5
405_1
91 years, male
391.7
251_1
78 years, male
391.3
406_1
79 years, male
387.3
288_1
66 years, female
387.0
389_1
86 years, female
382.1
189_1
76 years, male
367.4
254_1
77 years, female
362.0
394_1
75 years, female
356.9
526_1
61 years, male
355.5
286_1
68 years, female
352.7
517_1
88 years, male
350.3
396_1
62 years, male
347.7
153_1
70 years, female
343.4
314_1
67 years, male
337.7
115_1
83 years, male
335.4
265_1
87 years, male
334.2
139_1
64 years, female
330.8
42_1
85 years, male
320.1
246_1
77 years, male
313.9
480_1
63 years, male
311.4
315_1
62 years, female
306.6
117_1
61 years, male
301.5
495_1
57 years, female
284.6
229_1
69 years, female
280.3
324_1
76 years, male
275.3
81_1
67 years, male
274.7
109_1
81 years, female
265.1
468_1
89 years, male
264.1
126_1
63 years, male
252.8
313_1
79 years, female
251.3
266_1
85 years, male
248.3
119_1
70 years, female
244.3
43_1
64 years, female
232.8
217_1
76 years, male
229.7
142_1
61 years, female
219.2
9_1
66 years, female
218.3
499_1
55 years, female
209.1
89_1
63 years, male
183.5
501_1
88 years, male
179.1
162_1
79 years, female
160.4
32_1
67 years, male
124.0
466_1
57 years, female
119.4
414_1
84 years, female
116.3
415_1
77 years, female
116.3
490_1
67 years, female
105.8
491_1
89 years, female
98.6
149_1
88 years, male
94.7
413_1
59 years, female
89.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.