We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1378.4
nTPM
FANTOM5:
1290.0
Scaled Tags Per Million
Pig:
821.5
nTPM
Allen mouse:
19.6
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1378.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 764.0
1984
Male, age 76, both hemispheres
809.2
2301
Female, age 85, both hemispheres
789.9
2188
Female, age 91, both hemispheres
739.4
2090
Male, age 80, both hemispheres
717.3
Dorsal cochlear nucleus nTPM: 839.0
2058
Male, age 76, both hemispheres
957.3
2370
Male, age 61, both hemispheres
882.6
2187
Female, age 91, both hemispheres
878.6
2802
Male, age 74, right hemisphere
834.8
2378
Male, age 80, both hemispheres
641.7
Dorsal tegmental nucleus nTPM: 892.3
2083
Male, age 80, both hemispheres
996.5
2358
Male, age 61, both hemispheres
960.7
2326
Male, age 74, both hemispheres
811.5
1936
Male, age 76, left hemisphere
800.5
Dorsolateral tegmental area nTPM: 841.9
2654
Male, age 80, both hemispheres
962.3
2141
Male, age 76, both hemispheres
891.8
2751
Female, age 85, both hemispheres
868.2
2360
Male, age 74, both hemispheres
837.4
2337
Male, age 61, both hemispheres
649.8
Kolliker-Fuse nucleus nTPM: 960.4
2163
Male, age 80, both hemispheres
1206.3
2315
Male, age 76, right hemisphere
850.9
2793
Female, age 91, left hemisphere
824.0
Lateral lemniscal nuclei nTPM: 1149.7
2169
Male, age 76, both hemispheres
1459.8
2036
Male, age 80, both hemispheres
1445.4
2746
Female, age 85, left hemisphere
1176.7
2453
Male, age 74, right hemisphere
923.6
2320
Female, age 91, left hemisphere
742.9
Lateral parabrachial nucleus nTPM: 1050.8
2139
Female, age 85, right hemisphere
1392.3
2790
Male, age 61, both hemispheres
1123.6
2013
Male, age 80, both hemispheres
1001.8
2792
Male, age 76, both hemispheres
685.5
Lateral vestibular nucleus nTPM: 990.3
2184
Male, age 76, both hemispheres
1135.5
2311
Male, age 80, both hemispheres
845.0
Locus coeruleus nTPM: 1289.1
2123
Female, age 91, both hemispheres
1712.0
2014
Male, age 55, unknown
1469.6
2720
Male, age 74, both hemispheres
1278.8
2317
Female, age 72, unknown
1239.2
1980
Male, age 76, both hemispheres
1177.7
2788
Male, age 74, unknown
1093.1
2162
Male, age 80, both hemispheres
1053.0
Medial parabrachial nucleus nTPM: 963.8
2156
Male, age 61, both hemispheres
1084.2
2170
Female, age 91, both hemispheres
1056.5
2854
Male, age 80, both hemispheres
1044.8
2786
Male, age 76, both hemispheres
840.1
2463
Female, age 85, right hemisphere
793.3
Medial periolivary nuclei nTPM: 1151.6
2171
Female, age 85, both hemispheres
1641.3
2063
Male, age 76, both hemispheres
1599.8
2791
Male, age 74, right hemisphere
1086.4
2081
Male, age 80, both hemispheres
806.4
2458
Female, age 91, both hemispheres
624.1
Motor facial nucleus nTPM: 1096.3
2062
Male, age 76, both hemispheres
1713.7
2365
Male, age 74, right hemisphere
1184.8
2327
Male, age 80, both hemispheres
1020.4
2697
Female, age 85, both hemispheres
958.0
2126
Male, age 61, both hemispheres
897.7
2795
Female, age 91, both hemispheres
803.1
Motor trigeminal nucleus nTPM: 908.2
2079
Male, age 80, both hemispheres
1239.0
2335
Male, age 61, both hemispheres
950.5
2560
Male, age 74, both hemispheres
857.1
2309
Male, age 76, both hemispheres
821.9
2321
Female, age 91, both hemispheres
672.2
Nuclei of the trapezoid body nTPM: 1319.8
1983
Male, age 76, both hemispheres
1656.0
2735
Female, age 85, both hemispheres
1640.1
2159
Male, age 61, both hemispheres
1616.8
2166
Male, age 80, both hemispheres
1001.9
2368
Female, age 91, both hemispheres
684.4
Nucleus raphe magnus nTPM: 1368.1
2160
Male, age 61, both hemispheres
2076.9
2172
Female, age 85, both hemispheres
1691.1
2455
Male, age 74, both hemispheres
1367.8
2051
Male, age 76, both hemispheres
1270.6
2328
Male, age 80, both hemispheres
1084.0
2459
Female, age 91, both hemispheres
718.1
Paramedian reticular nucleus nTPM: 1111.0
2050
Female, age 85, both hemispheres
1370.0
2313
Male, age 61, both hemispheres
1186.6
2057
Male, age 80, both hemispheres
1171.3
2052
Male, age 76, both hemispheres
716.3
Pedunculopontine tegmental nucleus nTPM: 898.3
2334
Male, age 80, both hemispheres
956.5
1921
Female, age 85, both hemispheres
938.2
2338
Male, age 61, both hemispheres
800.2
Pontine nuclei nTPM: 1378.4
2787
Female, age 85, both hemispheres
1903.6
1863
Male, age 55, unknown
1840.0
2727
Male, age 61, right hemisphere
1829.9
1968
Male, age 76, left hemisphere
1478.7
2109
Female, age 72, unknown
1403.4
2115
Male, age 80, left hemisphere
950.9
2454
Male, age 74, left hemisphere
872.1
2319
Female, age 91, both hemispheres
748.6
Pontine raphe nucleus nTPM: 1147.7
2122
Female, age 85, midline
1318.2
2853
Male, age 76, midline
977.2
Posteroventral cochlear nucleus nTPM: 811.8
2752
Female, age 85, both hemispheres
1154.0
2070
Male, age 76, both hemispheres
906.2
2371
Male, age 61, both hemispheres
859.4
2341
Male, age 80, both hemispheres
575.1
2135
Female, age 91, both hemispheres
564.5
Principal sensory trigeminal nucleus nTPM: 1213.9
2158
Male, age 61, both hemispheres
1755.6
2008
Male, age 80, left hemisphere
1361.3
2324
Male, age 76, both hemispheres
1023.9
2367
Female, age 91, left hemisphere
715.0
Reticular pontine nucleus, caudal nTPM: 984.2
2332
Male, age 80, right hemisphere
1221.9
2092
Male, age 76, both hemispheres
1207.2
2559
Male, age 74, both hemispheres
808.8
2457
Female, age 91, both hemispheres
698.8
Reticular pontine nucleus, oral nTPM: 953.0
2012
Female, age 85, both hemispheres
1159.3
2361
Male, age 74, both hemispheres
1055.8
1939
Male, age 80, both hemispheres
962.2
2167
Male, age 76, both hemispheres
870.2
2366
Female, age 91, both hemispheres
717.5
Reticulotegmental nucleus nTPM: 946.2
2325
Male, age 76, both hemispheres
1153.1
2333
Male, age 80, both hemispheres
936.2
2452
Male, age 74, both hemispheres
873.2
2322
Female, age 91, both hemispheres
822.6
Spinal trigeminal nucleus, oral nTPM: 946.5
2737
Female, age 85, both hemispheres
1014.7
2164
Male, age 80, both hemispheres
1010.5
1978
Male, age 76, both hemispheres
814.3
Subcoeruleus area nTPM: 984.7
2323
Female, age 91, left hemisphere
1134.0
1958
Male, age 80, both hemispheres
1127.7
2089
Male, age 76, left hemisphere
1094.0
2451
Male, age 74, both hemispheres
799.8
2369
Female, age 85, left hemisphere
768.0
Superior olive nTPM: 1093.1
1875
Female, age 85, both hemispheres
1394.0
2364
Male, age 74, right hemisphere
1200.7
2020
Male, age 76, both hemispheres
1113.6
2329
Male, age 80, right hemisphere
993.6
2561
Female, age 91, both hemispheres
763.8
Ventral periolivary nuclei nTPM: 1204.6
2130
Female, age 85, both hemispheres
1573.4
2165
Male, age 80, both hemispheres
1445.6
2023
Male, age 76, both hemispheres
1022.0
2794
Female, age 91, left hemisphere
777.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 975.5
1959
Male, age 76, both hemispheres
1189.1
2840
Female, age 85, both hemispheres
1043.9
2449
Male, age 74, both hemispheres
1038.8
2359
Male, age 61, both hemispheres
1003.4
2161
Male, age 80, both hemispheres
991.4
2456
Female, age 91, both hemispheres
586.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
821.5
Pig sample
Sample description
nTPM
Pons nTPM: 821.6
Samples: 4
Max nTPM: 1020.0
Min nTPM: 606.9
Sample A
Female
1020.0
Sample B
Female
606.9
Sample C
Male
777.5
Sample D
Male
881.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.