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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
534.4
nTPM
HPA Brain:
1180.6
nTPM
GTEx:
534.4
nTPM
FANTOM5:
681.7
Scaled Tags Per Million
Pig:
845.7
nTPM
Mouse:
1497.8
nTPM
Allen mouse:
24.6
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1180.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 955.3
2586
Male, age 75, left hemisphere
1352.6
1827
Male, age 72, unknown
1158.5
2828
Female, age 72, unknown
1015.3
2411
Female, age 72, unknown
988.9
2019
Male, age 18, unknown
953.7
2666
Male, age 74, left hemisphere
927.1
1870
Female, age 42, unknown
834.0
2219
Male, age 76, both hemispheres
818.1
1833
Male, age 53, unknown
779.5
1830
Male, age 51, unknown
725.4
Dorsal raphe nucleus nTPM: 1013.9
2298
Female, age 72, unknown
1289.0
2047
Male, age 72, unknown
1095.2
1828
Male, age 53, unknown
1031.4
2750
Male, age 76, both hemispheres
900.8
2016
Female, age 72, unknown
753.3
Inferior colliculus nTPM: 870.3
2097
Female, age 72, unknown
1019.6
1848
Female, age 42, unknown
864.4
1890
Male, age 53, unknown
810.7
2849
Male, age 72, unknown
786.4
Median raphe nucleus nTPM: 1019.6
2220
Male, age 76, midline
1019.6
Periaquaductal grey, anterior nTPM: 1004.6
1947
Male, age 18, unknown
1091.7
1795
Male, age 51, unknown
1084.7
2502
Female, age 75, unknown
837.3
Periaquaductal grey, dorsal nTPM: 764.7
1840
Male, age 53, unknown
860.0
1831
Male, age 72, unknown
803.1
2850
Male, age 76, both hemispheres
702.7
2464
Female, age 72, unknown
693.1
Periaquaductal grey, lateral nTPM: 770.6
2272
Male, age 74, both hemispheres
886.2
2053
Male, age 18, unknown
773.9
2140
Male, age 76, both hemispheres
651.7
Pretectal area nTPM: 1039.2
1816
Male, age 51, unknown
1392.6
2007
Male, age 72, unknown
1266.6
1944
Female, age 72, unknown
1264.5
1817
Female, age 42, unknown
1203.5
2667
Female, age 75, unknown
1175.5
1815
Male, age 53, unknown
1020.9
2224
Female, age 72, unknown
940.1
2273
Male, age 74, both hemispheres
930.9
2825
Male, age 18, unknown
824.6
2407
Male, age 75, both hemispheres
807.1
2316
Male, age 76, right hemisphere
605.3
Red nucleus nTPM: 841.9
1821
Female, age 72, unknown
1018.2
2584
Male, age 75, left hemisphere
937.3
2785
Male, age 18, unknown
927.3
2725
Female, age 75, unknown
922.3
1954
Female, age 42, unknown
844.1
2503
Female, age 72, unknown
834.6
2769
Male, age 72, unknown
823.9
2227
Male, age 72, unknown
796.5
1865
Male, age 51, unknown
776.1
1904
Male, age 53, unknown
773.8
2588
Male, age 74, left hemisphere
760.1
2823
Male, age 76, right hemisphere
688.3
Substantia nigra nTPM: 1180.6
1916
Female, age 42, unknown
1736.8
1941
Male, age 53, unknown
1414.7
1851
Male, age 51, unknown
1348.7
1889
Female, age 72, unknown
1251.7
2665
Male, age 74, both hemispheres
1101.5
2241
Male, age 72, unknown
1058.5
2583
Male, age 75, right hemisphere
1056.6
2409
Female, age 72, unknown
1017.5
2699
Male, age 18, unknown
976.7
2590
Female, age 75, unknown
843.0
Superior colliculus nTPM: 920.6
2087
Female, age 72, unknown
1152.5
2668
Female, age 75, unknown
1150.2
1796
Male, age 53, unknown
1110.9
2261
Male, age 18, unknown
1051.0
2664
Male, age 75, both hemispheres
1029.1
2587
Male, age 74, left hemisphere
820.5
1839
Male, age 51, unknown
789.6
1895
Male, age 76, right hemisphere
754.8
1913
Female, age 42, unknown
700.0
1995
Male, age 72, unknown
647.9
Ventral tegmental area nTPM: 1073.4
1915
Female, age 42, unknown
1291.7
2410
Female, age 72, unknown
1254.3
2218
Male, age 76, both hemispheres
1152.0
1942
Male, age 51, unknown
967.7
2223
Female, age 72, unknown
943.9
2021
Male, age 53, unknown
830.8
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
534.4
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 534.4
Samples: 139
Max nTPM: 1481.0
Min nTPM: 230.4
Std nTPM: 177.7
Median nTPM: 493.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
1481.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
1092.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
1011.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
868.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
837.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
823.9
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
819.3
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
803.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
803.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
797.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
796.2
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
796.1
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
786.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
785.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
783.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
776.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
764.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
760.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
756.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
734.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
732.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
719.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
710.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
703.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
700.5
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
699.4
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
696.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
692.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
688.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
687.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
662.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
659.1
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
638.9
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
637.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
630.2
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
622.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
613.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
607.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
607.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
605.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
604.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
589.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
586.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
565.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
565.1
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
564.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
557.9
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
554.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
553.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
550.0
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
549.4
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
536.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
534.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
534.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
534.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
532.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
527.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
527.9
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
527.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
525.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
522.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
518.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
515.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
512.5
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
507.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
505.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
502.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
500.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
496.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
493.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
492.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
478.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
475.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
470.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
468.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
464.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
464.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
461.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
458.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
454.6
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
450.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
449.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
449.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
449.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
448.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
447.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
446.4
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
442.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
442.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
440.8
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
437.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
437.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
435.4
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
432.4
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
431.5
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
431.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
430.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
430.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
429.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
428.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
428.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
423.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
423.3
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
417.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
415.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
415.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
408.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
407.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
402.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
401.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
400.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
392.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
391.9
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
391.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
384.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
381.9
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
381.3
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
379.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
378.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
369.6
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
369.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
366.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
365.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
365.0
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
365.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
358.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
356.7
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
351.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
351.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
345.7
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
341.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
332.1
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
329.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
328.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
316.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
296.2
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
290.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
261.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
230.4
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1497.8
Mouse sample
Sample description
nTPM
Midbrain nTPM: 1497.8
Samples: 4
Max nTPM: 1632.2
Min nTPM: 1412.7
Sample A
Male
1632.2
Sample B
Male
1438.4
Sample C
Female
1412.7
Sample D
Female
1507.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.