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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
102.8
nTPM
FANTOM5:
65.3
Scaled Tags Per Million
Pig:
20.7
nTPM
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
102.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 89.9
2301
Female, age 85, both hemispheres
116.8
2188
Female, age 91, both hemispheres
103.6
2090
Male, age 80, both hemispheres
79.5
1984
Male, age 76, both hemispheres
59.9
Dorsal cochlear nucleus nTPM: 78.5
2370
Male, age 61, both hemispheres
94.5
2187
Female, age 91, both hemispheres
87.5
2802
Male, age 74, right hemisphere
85.0
2378
Male, age 80, both hemispheres
73.7
2058
Male, age 76, both hemispheres
51.8
Dorsal tegmental nucleus nTPM: 81.3
2083
Male, age 80, both hemispheres
114.9
2326
Male, age 74, both hemispheres
79.6
1936
Male, age 76, left hemisphere
70.4
2358
Male, age 61, both hemispheres
60.4
Dorsolateral tegmental area nTPM: 93.7
2337
Male, age 61, both hemispheres
154.9
2654
Male, age 80, both hemispheres
114.9
2751
Female, age 85, both hemispheres
111.9
2360
Male, age 74, both hemispheres
46.6
2141
Male, age 76, both hemispheres
40.3
Kolliker-Fuse nucleus nTPM: 82.5
2793
Female, age 91, left hemisphere
120.1
2163
Male, age 80, both hemispheres
77.8
2315
Male, age 76, right hemisphere
49.6
Lateral lemniscal nuclei nTPM: 80.1
2320
Female, age 91, left hemisphere
113.0
2746
Female, age 85, left hemisphere
84.1
2036
Male, age 80, both hemispheres
71.7
2453
Male, age 74, right hemisphere
67.2
2169
Male, age 76, both hemispheres
64.4
Lateral parabrachial nucleus nTPM: 93.7
2790
Male, age 61, both hemispheres
133.0
2792
Male, age 76, both hemispheres
98.0
2013
Male, age 80, both hemispheres
89.2
2139
Female, age 85, right hemisphere
54.5
Lateral vestibular nucleus nTPM: 86.3
2311
Male, age 80, both hemispheres
90.5
2184
Male, age 76, both hemispheres
82.2
Locus coeruleus nTPM: 36.4
2162
Male, age 80, both hemispheres
50.1
2720
Male, age 74, both hemispheres
47.3
2317
Female, age 72, unknown
43.9
2123
Female, age 91, both hemispheres
37.2
2014
Male, age 55, unknown
28.6
1980
Male, age 76, both hemispheres
26.3
2788
Male, age 74, unknown
21.7
Medial parabrachial nucleus nTPM: 100.2
2156
Male, age 61, both hemispheres
123.6
2463
Female, age 85, right hemisphere
122.7
2170
Female, age 91, both hemispheres
101.5
2786
Male, age 76, both hemispheres
82.0
2854
Male, age 80, both hemispheres
71.2
Medial periolivary nuclei nTPM: 69.2
2081
Male, age 80, both hemispheres
93.5
2458
Female, age 91, both hemispheres
93.0
2063
Male, age 76, both hemispheres
61.0
2791
Male, age 74, right hemisphere
51.0
2171
Female, age 85, both hemispheres
47.4
Motor facial nucleus nTPM: 77.2
2126
Male, age 61, both hemispheres
119.9
2697
Female, age 85, both hemispheres
84.2
2327
Male, age 80, both hemispheres
71.7
2062
Male, age 76, both hemispheres
63.9
2795
Female, age 91, both hemispheres
62.2
2365
Male, age 74, right hemisphere
61.2
Motor trigeminal nucleus nTPM: 92.3
2321
Female, age 91, both hemispheres
114.3
2560
Male, age 74, both hemispheres
92.6
2309
Male, age 76, both hemispheres
86.0
2335
Male, age 61, both hemispheres
86.0
2079
Male, age 80, both hemispheres
82.5
Nuclei of the trapezoid body nTPM: 71.6
2166
Male, age 80, both hemispheres
101.4
2368
Female, age 91, both hemispheres
77.5
1983
Male, age 76, both hemispheres
72.6
2159
Male, age 61, both hemispheres
66.0
2735
Female, age 85, both hemispheres
40.8
Nucleus raphe magnus nTPM: 67.2
2328
Male, age 80, both hemispheres
94.7
2459
Female, age 91, both hemispheres
90.2
2051
Male, age 76, both hemispheres
82.2
2455
Male, age 74, both hemispheres
64.6
2160
Male, age 61, both hemispheres
38.1
2172
Female, age 85, both hemispheres
33.4
Paramedian reticular nucleus nTPM: 71.9
2057
Male, age 80, both hemispheres
83.5
2052
Male, age 76, both hemispheres
80.4
2313
Male, age 61, both hemispheres
69.3
2050
Female, age 85, both hemispheres
54.3
Pedunculopontine tegmental nucleus nTPM: 74.8
2338
Male, age 61, both hemispheres
97.0
2334
Male, age 80, both hemispheres
71.8
1921
Female, age 85, both hemispheres
55.5
Pontine nuclei nTPM: 87.9
2115
Male, age 80, left hemisphere
117.4
2319
Female, age 91, both hemispheres
106.2
1968
Male, age 76, left hemisphere
104.3
2109
Female, age 72, unknown
96.0
2454
Male, age 74, left hemisphere
96.0
1863
Male, age 55, unknown
67.4
2787
Female, age 85, both hemispheres
62.2
2727
Male, age 61, right hemisphere
53.7
Pontine raphe nucleus nTPM: 43.5
2853
Male, age 76, midline
47.8
2122
Female, age 85, midline
39.2
Posteroventral cochlear nucleus nTPM: 99.0
2070
Male, age 76, both hemispheres
120.3
2135
Female, age 91, both hemispheres
114.1
2341
Male, age 80, both hemispheres
109.1
2371
Male, age 61, both hemispheres
98.4
2752
Female, age 85, both hemispheres
53.0
Principal sensory trigeminal nucleus nTPM: 74.7
2367
Female, age 91, left hemisphere
98.0
2324
Male, age 76, both hemispheres
76.3
2008
Male, age 80, left hemisphere
65.6
2158
Male, age 61, both hemispheres
58.7
Reticular pontine nucleus, caudal nTPM: 102.8
2457
Female, age 91, both hemispheres
118.8
2559
Male, age 74, both hemispheres
115.6
2092
Male, age 76, both hemispheres
89.6
2332
Male, age 80, right hemisphere
87.2
Reticular pontine nucleus, oral nTPM: 88.0
2366
Female, age 91, both hemispheres
111.6
1939
Male, age 80, both hemispheres
96.8
2167
Male, age 76, both hemispheres
82.7
2361
Male, age 74, both hemispheres
79.1
2012
Female, age 85, both hemispheres
69.9
Reticulotegmental nucleus nTPM: 81.1
2452
Male, age 74, both hemispheres
97.0
2333
Male, age 80, both hemispheres
94.1
2322
Female, age 91, both hemispheres
84.8
2325
Male, age 76, both hemispheres
48.7
Spinal trigeminal nucleus, oral nTPM: 81.4
2164
Male, age 80, both hemispheres
96.0
1978
Male, age 76, both hemispheres
91.5
2737
Female, age 85, both hemispheres
56.8
Subcoeruleus area nTPM: 77.6
2369
Female, age 85, left hemisphere
116.9
2451
Male, age 74, both hemispheres
77.7
2089
Male, age 76, left hemisphere
73.1
1958
Male, age 80, both hemispheres
70.6
2323
Female, age 91, left hemisphere
49.9
Superior olive nTPM: 84.0
2329
Male, age 80, right hemisphere
105.8
2020
Male, age 76, both hemispheres
101.7
2561
Female, age 91, both hemispheres
92.4
2364
Male, age 74, right hemisphere
62.4
1875
Female, age 85, both hemispheres
57.9
Ventral periolivary nuclei nTPM: 65.8
2023
Male, age 76, both hemispheres
94.4
2165
Male, age 80, both hemispheres
76.3
2794
Female, age 91, left hemisphere
62.6
2130
Female, age 85, both hemispheres
29.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 81.1
2456
Female, age 91, both hemispheres
99.1
2359
Male, age 61, both hemispheres
88.5
2161
Male, age 80, both hemispheres
87.4
1959
Male, age 76, both hemispheres
79.3
2449
Male, age 74, both hemispheres
69.7
2840
Female, age 85, both hemispheres
62.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.