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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
30.4
nTPM
HPA Brain:
59.0
nTPM
GTEx:
30.4
nTPM
FANTOM5:
26.5
Scaled Tags Per Million
Pig:
6.4
nTPM
Mouse:
1.2
nTPM
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
59.0
Sample id
Sample description
nTPM
Amygdala nTPM: 46.4
2814
Male, age 76, right hemisphere
66.0
2695
Female, age 67, right hemisphere
54.4
2517
Female, age 94, left hemisphere
41.6
2514
Male, age 75, right hemisphere
36.9
1987
Female, age 91, left hemisphere
32.9
Basal amygdala nTPM: 39.0
2827
Female, age 67, right hemisphere
64.1
2685
Female, age 94, left hemisphere
43.0
2110
Male, age 80, left hemisphere
41.9
1955
Male, age 76, both hemispheres
37.1
2609
Male, age 75, right hemisphere
32.2
2243
Female, age 91, right hemisphere
15.8
Central amygdala nTPM: 47.9
2826
Female, age 94, left hemisphere
74.7
1905
Male, age 76, both hemispheres
59.1
2239
Male, age 80, left hemisphere
37.6
2701
Female, age 91, right hemisphere
35.6
2515
Male, age 75, right hemisphere
32.6
Corticomedial amygdala nTPM: 23.2
2535
Female, age 67, right hemisphere
42.6
2428
Male, age 75, right hemisphere
26.0
2429
Female, age 94, left hemisphere
25.6
2240
Male, age 76, both hemispheres
18.9
2829
Male, age 80, left hemisphere
18.2
2242
Female, age 91, right hemisphere
7.8
Lateral amygdala nTPM: 59.0
2830
Female, age 67, right hemisphere
81.7
2534
Female, age 94, left hemisphere
58.5
1883
Male, age 76, both hemispheres
58.4
2256
Male, age 80, left hemisphere
58.0
2516
Male, age 75, right hemisphere
54.5
2255
Female, age 91, right hemisphere
43.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
30.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 30.4
Samples: 152
Max nTPM: 140.7
Min nTPM: 1.8
Std nTPM: 20.0
Median nTPM: 26.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
140.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
87.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
87.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
80.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
72.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
67.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
65.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
65.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
65.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
65.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
64.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
63.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
60.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
58.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
55.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
55.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
53.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
53.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
53.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
52.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
50.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
50.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
50.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
49.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
49.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
48.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
48.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
46.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
45.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
44.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
44.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
43.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
43.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
42.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
41.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
41.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
40.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
40.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
40.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
40.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
39.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
39.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
38.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
37.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
37.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
37.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
36.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
36.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
36.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
36.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
35.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
35.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
35.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
34.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
34.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
34.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
34.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
34.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
32.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
32.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
32.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
31.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
31.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
29.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
29.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
28.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
28.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
28.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
27.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
27.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
27.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
26.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
26.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
26.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
26.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
26.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
26.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
26.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
25.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
25.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
25.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
25.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
24.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
24.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
22.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
22.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
22.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
21.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
21.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
20.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
20.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
20.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
20.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
20.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
19.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
19.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
19.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
19.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
19.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
19.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
19.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
18.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
18.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
18.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
17.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
17.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
17.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
16.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
16.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
16.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
16.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
16.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
15.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
15.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
15.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
15.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
15.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
14.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
14.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
14.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
13.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
13.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
13.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
13.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
13.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
13.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
12.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
12.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
12.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
12.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
12.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
11.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
11.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
11.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
11.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
9.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
9.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
9.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
9.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
9.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
9.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
8.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
8.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
8.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
8.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
7.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
7.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
7.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
6.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
6.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
2.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
1.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.