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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
150.9
nTPM
HPA Brain:
277.3
nTPM
GTEx:
150.9
nTPM
FANTOM5:
178.6
Scaled Tags Per Million
Pig:
34.5
nTPM
Mouse:
48.8
nTPM
Allen mouse:
3.1
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
277.3
Sample id
Sample description
nTPM
Amygdala nTPM: 277.3
2814
Male, age 76, right hemisphere
324.8
1987
Female, age 91, left hemisphere
312.2
2695
Female, age 67, right hemisphere
278.0
2514
Male, age 75, right hemisphere
252.7
2517
Female, age 94, left hemisphere
218.9
Basal amygdala nTPM: 193.9
2110
Male, age 80, left hemisphere
236.7
2609
Male, age 75, right hemisphere
228.9
1955
Male, age 76, both hemispheres
219.0
2685
Female, age 94, left hemisphere
170.5
2243
Female, age 91, right hemisphere
159.7
2827
Female, age 67, right hemisphere
148.5
Central amygdala nTPM: 237.1
1905
Male, age 76, both hemispheres
308.1
2515
Male, age 75, right hemisphere
261.7
2826
Female, age 94, left hemisphere
213.8
2701
Female, age 91, right hemisphere
206.2
2239
Male, age 80, left hemisphere
195.8
Corticomedial amygdala nTPM: 188.1
2428
Male, age 75, right hemisphere
240.0
2242
Female, age 91, right hemisphere
210.1
2829
Male, age 80, left hemisphere
189.1
2240
Male, age 76, both hemispheres
187.0
2429
Female, age 94, left hemisphere
172.8
2535
Female, age 67, right hemisphere
129.5
Lateral amygdala nTPM: 227.5
2256
Male, age 80, left hemisphere
258.7
1883
Male, age 76, both hemispheres
258.5
2516
Male, age 75, right hemisphere
241.3
2255
Female, age 91, right hemisphere
219.3
2830
Female, age 67, right hemisphere
201.3
2534
Female, age 94, left hemisphere
186.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
150.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 150.9
Samples: 152
Max nTPM: 345.1
Min nTPM: 61.5
Std nTPM: 42.1
Median nTPM: 143.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
345.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
294.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
289.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
268.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
263.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
262.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
244.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
242.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
227.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
215.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
211.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
203.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
201.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
198.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
196.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
196.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
190.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
190.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
187.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
186.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
185.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
185.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
184.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
184.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
183.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
183.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
182.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
181.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
177.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
177.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
176.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
176.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
176.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
174.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
174.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
174.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
171.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
170.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
170.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
166.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
166.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
166.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
165.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
164.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
163.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
162.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
162.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
162.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
160.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
160.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
160.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
159.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
159.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
158.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
157.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
156.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
156.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
155.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
155.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
154.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
154.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
153.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
153.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
153.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
152.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
151.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
150.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
150.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
149.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
149.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
148.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
148.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
148.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
146.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
144.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
144.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
143.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
143.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
142.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
141.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
141.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
141.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
140.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
140.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
139.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
139.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
139.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
137.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
137.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
137.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
135.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
135.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
135.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
134.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
133.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
132.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
131.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
130.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
128.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
128.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
128.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
127.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
126.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
126.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
124.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
124.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
124.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
124.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
123.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
123.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
123.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
123.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
123.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
123.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
121.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
121.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
120.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
120.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
120.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
119.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
118.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
118.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
117.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
117.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
116.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
116.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
115.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
115.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
113.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
112.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
111.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
110.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
110.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
110.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
109.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
108.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
108.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
106.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
105.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
104.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
104.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
103.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
102.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
102.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
101.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
99.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
99.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
98.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
97.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
96.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
87.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
61.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
48.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 48.9
Samples: 4
Max nTPM: 67.1
Min nTPM: 38.3
Sample A
Male
44.3
Sample B
Male
38.3
Sample C
Female
67.1
Sample D
Female
45.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.