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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
442.8
nTPM
HPA Brain:
646.2
nTPM
GTEx:
442.8
nTPM
FANTOM5:
487.4
Scaled Tags Per Million
Pig:
321.5
nTPM
Mouse:
528.5
nTPM
Allen mouse:
31.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
646.2
Sample id
Sample description
nTPM
Amygdala nTPM: 191.2
2517
Female, age 94, left hemisphere
395.8
1987
Female, age 91, left hemisphere
236.1
2514
Male, age 75, right hemisphere
210.9
2814
Male, age 76, right hemisphere
64.4
2695
Female, age 67, right hemisphere
49.0
Basal amygdala nTPM: 594.7
2685
Female, age 94, left hemisphere
949.9
2827
Female, age 67, right hemisphere
697.5
2243
Female, age 91, right hemisphere
638.1
2110
Male, age 80, left hemisphere
544.0
2609
Male, age 75, right hemisphere
486.7
1955
Male, age 76, both hemispheres
252.2
Central amygdala nTPM: 279.4
2826
Female, age 94, left hemisphere
660.2
2701
Female, age 91, right hemisphere
285.0
2239
Male, age 80, left hemisphere
239.4
2515
Male, age 75, right hemisphere
164.8
1905
Male, age 76, both hemispheres
47.6
Corticomedial amygdala nTPM: 646.2
2242
Female, age 91, right hemisphere
931.3
2535
Female, age 67, right hemisphere
856.8
2829
Male, age 80, left hemisphere
845.2
2428
Male, age 75, right hemisphere
490.0
2429
Female, age 94, left hemisphere
476.2
2240
Male, age 76, both hemispheres
277.6
Lateral amygdala nTPM: 317.7
2534
Female, age 94, left hemisphere
780.4
2256
Male, age 80, left hemisphere
491.2
2255
Female, age 91, right hemisphere
220.7
2830
Female, age 67, right hemisphere
164.1
1883
Male, age 76, both hemispheres
139.3
2516
Male, age 75, right hemisphere
110.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
442.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 442.8
Samples: 152
Max nTPM: 1913.7
Min nTPM: 17.0
Std nTPM: 318.2
Median nTPM: 360.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1913.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
1326.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
1303.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
1267.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
1235.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
1155.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
1033.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
1024.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
1014.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
1007.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
990.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
960.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
938.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
912.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
896.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
896.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
882.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
858.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
811.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
802.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
792.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
787.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
780.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
779.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
759.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
729.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
721.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
719.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
713.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
712.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
700.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
697.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
680.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
656.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
641.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
633.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
621.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
619.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
593.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
568.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
566.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
565.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
560.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
554.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
548.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
541.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
538.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
537.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
526.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
526.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
524.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
523.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
520.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
508.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
485.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
479.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
478.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
472.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
466.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
458.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
438.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
435.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
432.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
425.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
423.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
417.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
412.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
409.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
406.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
405.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
388.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
386.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
383.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
381.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
366.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
361.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
359.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
333.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
321.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
321.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
310.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
308.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
300.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
299.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
298.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
294.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
292.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
291.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
285.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
283.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
280.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
272.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
267.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
267.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
266.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
264.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
263.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
262.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
254.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
251.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
251.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
250.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
248.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
242.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
242.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
239.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
233.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
232.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
231.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
220.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
219.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
219.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
217.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
216.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
216.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
216.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
210.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
209.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
208.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
201.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
200.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
182.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
180.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
178.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
174.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
173.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
168.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
163.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
161.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
156.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
156.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
151.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
151.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
150.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
146.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
132.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
128.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
111.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
107.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
103.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
101.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
100.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
96.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
93.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
73.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
70.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
66.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
46.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
36.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
24.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
17.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
17.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
528.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 528.5
Samples: 4
Max nTPM: 588.1
Min nTPM: 495.1
Sample A
Male
495.1
Sample B
Male
506.2
Sample C
Female
588.1
Sample D
Female
524.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.