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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
102.5
nTPM
HPA Brain:
33.9
nTPM
GTEx:
102.5
nTPM
FANTOM5:
61.4
Scaled Tags Per Million
Pig:
202.2
nTPM
Mouse:
76.6
nTPM
Allen mouse:
3.9
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
33.9
Sample id
Sample description
nTPM
Amygdala nTPM: 33.9
2514
Male, age 75, right hemisphere
41.2
2695
Female, age 67, right hemisphere
38.9
2517
Female, age 94, left hemisphere
37.6
1987
Female, age 91, left hemisphere
26.5
2814
Male, age 76, right hemisphere
25.2
Basal amygdala nTPM: 33.6
2609
Male, age 75, right hemisphere
49.4
2110
Male, age 80, left hemisphere
44.7
1955
Male, age 76, both hemispheres
32.6
2243
Female, age 91, right hemisphere
29.0
2685
Female, age 94, left hemisphere
28.4
2827
Female, age 67, right hemisphere
17.2
Central amygdala nTPM: 33.6
2826
Female, age 94, left hemisphere
43.3
2239
Male, age 80, left hemisphere
37.7
2515
Male, age 75, right hemisphere
37.4
1905
Male, age 76, both hemispheres
29.0
2701
Female, age 91, right hemisphere
20.6
Corticomedial amygdala nTPM: 29.9
2829
Male, age 80, left hemisphere
40.7
2428
Male, age 75, right hemisphere
37.6
2429
Female, age 94, left hemisphere
32.3
2240
Male, age 76, both hemispheres
26.8
2242
Female, age 91, right hemisphere
25.0
2535
Female, age 67, right hemisphere
17.3
Lateral amygdala nTPM: 33.4
2516
Male, age 75, right hemisphere
46.5
2256
Male, age 80, left hemisphere
43.7
2534
Female, age 94, left hemisphere
38.5
2255
Female, age 91, right hemisphere
28.0
1883
Male, age 76, both hemispheres
24.3
2830
Female, age 67, right hemisphere
19.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
102.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 102.5
Samples: 152
Max nTPM: 327.2
Min nTPM: 2.8
Std nTPM: 56.2
Median nTPM: 94.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
327.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
264.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
247.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
245.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
240.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
236.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
218.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
205.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
190.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
189.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
186.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
186.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
186.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
184.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
183.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
183.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
181.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
178.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
178.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
175.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
170.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
167.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
162.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
159.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
157.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
154.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
148.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
146.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
141.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
141.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
140.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
137.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
137.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
136.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
133.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
133.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
133.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
132.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
132.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
128.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
127.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
127.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
126.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
125.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
124.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
124.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
123.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
119.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
114.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
114.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
112.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
112.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
112.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
111.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
111.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
110.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
110.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
109.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
108.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
108.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
106.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
106.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
106.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
106.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
106.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
103.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
103.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
102.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
102.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
100.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
100.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
97.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
96.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
96.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
95.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
94.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
94.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
92.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
92.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
90.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
90.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
90.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
90.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
86.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
85.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
85.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
82.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
81.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
81.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
81.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
80.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
80.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
78.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
78.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
78.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
77.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
77.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
77.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
76.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
76.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
76.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
74.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
74.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
74.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
73.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
73.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
69.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
68.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
67.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
62.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
61.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
61.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
60.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
60.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
60.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
60.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
60.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
59.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
59.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
58.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
58.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
58.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
55.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
54.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
54.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
51.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
50.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
50.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
50.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
49.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
44.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
41.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
40.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
39.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
39.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
39.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
38.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
37.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
37.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
35.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
35.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
34.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
30.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
29.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
27.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
26.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
25.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
22.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
20.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
13.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
11.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
2.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
76.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 76.6
Samples: 4
Max nTPM: 92.6
Min nTPM: 62.5
Sample A
Male
62.5
Sample B
Male
70.2
Sample C
Female
92.6
Sample D
Female
81.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
