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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
13.5
nTPM
HPA Brain:
6.4
nTPM
GTEx:
13.5
nTPM
FANTOM5:
7.6
Scaled Tags Per Million
Pig:
9.9
nTPM
Mouse:
3.9
nTPM
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
6.4
Sample id
Sample description
nTPM
Amygdala nTPM: 5.2
1987
Female, age 91, left hemisphere
8.7
2517
Female, age 94, left hemisphere
5.1
2695
Female, age 67, right hemisphere
5.1
2814
Male, age 76, right hemisphere
4.2
2514
Male, age 75, right hemisphere
3.1
Basal amygdala nTPM: 4.3
2110
Male, age 80, left hemisphere
6.9
2609
Male, age 75, right hemisphere
5.1
1955
Male, age 76, both hemispheres
4.3
2243
Female, age 91, right hemisphere
3.9
2685
Female, age 94, left hemisphere
3.4
2827
Female, age 67, right hemisphere
2.4
Central amygdala nTPM: 6.4
2515
Male, age 75, right hemisphere
9.0
2239
Male, age 80, left hemisphere
6.8
1905
Male, age 76, both hemispheres
6.2
2701
Female, age 91, right hemisphere
5.4
2826
Female, age 94, left hemisphere
4.8
Corticomedial amygdala nTPM: 3.8
2829
Male, age 80, left hemisphere
5.6
2428
Male, age 75, right hemisphere
4.6
2242
Female, age 91, right hemisphere
3.9
2429
Female, age 94, left hemisphere
3.4
2240
Male, age 76, both hemispheres
2.9
2535
Female, age 67, right hemisphere
2.6
Lateral amygdala nTPM: 4.9
2256
Male, age 80, left hemisphere
7.3
2255
Female, age 91, right hemisphere
5.9
1883
Male, age 76, both hemispheres
4.4
2516
Male, age 75, right hemisphere
4.3
2830
Female, age 67, right hemisphere
3.9
2534
Female, age 94, left hemisphere
3.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
13.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 13.5
Samples: 152
Max nTPM: 36.3
Min nTPM: 2.0
Std nTPM: 7.1
Median nTPM: 12.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
36.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
34.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
33.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
33.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
31.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
29.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
28.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
28.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
26.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
26.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
25.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
25.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
25.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
24.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
24.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
24.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
24.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
23.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
22.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
22.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
22.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
20.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
20.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
20.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
19.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
19.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
19.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
18.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
18.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
18.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
18.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
18.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
18.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
17.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
17.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
17.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
17.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
17.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
17.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
17.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
17.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
16.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
16.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
16.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
15.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
15.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
15.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
15.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
15.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
15.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
15.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
15.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
14.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
14.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
14.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
14.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
14.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
14.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
14.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
14.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
14.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
13.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
13.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
13.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
13.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
13.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
13.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
13.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
13.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
13.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
12.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
12.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
12.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
12.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
12.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
12.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
12.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
12.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
12.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
12.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
11.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
11.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
11.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
11.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
11.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
11.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
11.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
11.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
11.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
11.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
10.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
10.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
10.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
10.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
10.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
10.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
10.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
10.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
10.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
10.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
9.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
9.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
9.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
9.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
9.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
9.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
9.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
9.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
8.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
8.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
8.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
8.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
8.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
8.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
8.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
8.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
8.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
8.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
8.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
7.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
7.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
7.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
7.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
7.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
7.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
6.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
6.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
6.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
6.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
6.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
6.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
6.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
6.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
5.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
5.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
5.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
5.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
5.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
5.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
5.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
4.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
4.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
4.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
4.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
4.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
3.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
3.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
3.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
3.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
3.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
2.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
2.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.