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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
268.9
nTPM
FANTOM5:
779.8
Scaled Tags Per Million
Pig:
211.1
nTPM
Allen mouse:
18.1
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
268.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 102.0
1984
Male, age 76, both hemispheres
130.3
2188
Female, age 91, both hemispheres
114.6
2301
Female, age 85, both hemispheres
91.6
2090
Male, age 80, both hemispheres
71.5
Dorsal cochlear nucleus nTPM: 104.6
2187
Female, age 91, both hemispheres
139.7
2370
Male, age 61, both hemispheres
110.2
2058
Male, age 76, both hemispheres
107.0
2802
Male, age 74, right hemisphere
95.7
2378
Male, age 80, both hemispheres
70.4
Dorsal tegmental nucleus nTPM: 129.2
2083
Male, age 80, both hemispheres
152.5
2326
Male, age 74, both hemispheres
131.3
1936
Male, age 76, left hemisphere
123.2
2358
Male, age 61, both hemispheres
110.0
Dorsolateral tegmental area nTPM: 142.1
2360
Male, age 74, both hemispheres
169.1
2141
Male, age 76, both hemispheres
167.8
2751
Female, age 85, both hemispheres
159.3
2654
Male, age 80, both hemispheres
148.2
2337
Male, age 61, both hemispheres
66.2
Kolliker-Fuse nucleus nTPM: 173.9
2163
Male, age 80, both hemispheres
258.6
2315
Male, age 76, right hemisphere
143.7
2793
Female, age 91, left hemisphere
119.4
Lateral lemniscal nuclei nTPM: 170.4
2036
Male, age 80, both hemispheres
206.4
2169
Male, age 76, both hemispheres
194.0
2746
Female, age 85, left hemisphere
181.3
2453
Male, age 74, right hemisphere
160.7
2320
Female, age 91, left hemisphere
109.7
Lateral parabrachial nucleus nTPM: 151.0
2139
Female, age 85, right hemisphere
212.6
2790
Male, age 61, both hemispheres
149.9
2013
Male, age 80, both hemispheres
149.5
2792
Male, age 76, both hemispheres
92.0
Lateral vestibular nucleus nTPM: 161.3
2184
Male, age 76, both hemispheres
212.0
2311
Male, age 80, both hemispheres
110.5
Locus coeruleus nTPM: 268.9
2014
Male, age 55, unknown
332.6
2123
Female, age 91, both hemispheres
327.6
2720
Male, age 74, both hemispheres
309.2
2317
Female, age 72, unknown
253.4
2788
Male, age 74, unknown
236.1
1980
Male, age 76, both hemispheres
231.7
2162
Male, age 80, both hemispheres
191.6
Medial parabrachial nucleus nTPM: 148.6
2156
Male, age 61, both hemispheres
172.0
2170
Female, age 91, both hemispheres
167.7
2854
Male, age 80, both hemispheres
155.2
2786
Male, age 76, both hemispheres
134.8
2463
Female, age 85, right hemisphere
113.2
Medial periolivary nuclei nTPM: 156.1
2171
Female, age 85, both hemispheres
224.4
2063
Male, age 76, both hemispheres
209.0
2791
Male, age 74, right hemisphere
157.7
2458
Female, age 91, both hemispheres
95.0
2081
Male, age 80, both hemispheres
94.3
Motor facial nucleus nTPM: 155.1
2062
Male, age 76, both hemispheres
223.2
2365
Male, age 74, right hemisphere
185.2
2327
Male, age 80, both hemispheres
143.3
2697
Female, age 85, both hemispheres
141.8
2126
Male, age 61, both hemispheres
131.2
2795
Female, age 91, both hemispheres
106.0
Motor trigeminal nucleus nTPM: 135.8
2079
Male, age 80, both hemispheres
150.8
2309
Male, age 76, both hemispheres
146.8
2335
Male, age 61, both hemispheres
143.4
2560
Male, age 74, both hemispheres
134.8
2321
Female, age 91, both hemispheres
103.3
Nuclei of the trapezoid body nTPM: 182.4
2735
Female, age 85, both hemispheres
256.7
2159
Male, age 61, both hemispheres
227.7
1983
Male, age 76, both hemispheres
199.7
2166
Male, age 80, both hemispheres
135.6
2368
Female, age 91, both hemispheres
92.6
Nucleus raphe magnus nTPM: 189.1
2160
Male, age 61, both hemispheres
287.5
2172
Female, age 85, both hemispheres
235.1
2455
Male, age 74, both hemispheres
207.5
2051
Male, age 76, both hemispheres
151.9
2328
Male, age 80, both hemispheres
142.1
2459
Female, age 91, both hemispheres
110.4
Paramedian reticular nucleus nTPM: 197.9
2313
Male, age 61, both hemispheres
262.8
2050
Female, age 85, both hemispheres
226.2
2057
Male, age 80, both hemispheres
184.0
2052
Male, age 76, both hemispheres
118.6
Pedunculopontine tegmental nucleus nTPM: 157.8
1921
Female, age 85, both hemispheres
201.4
2334
Male, age 80, both hemispheres
168.8
2338
Male, age 61, both hemispheres
103.2
Pontine nuclei nTPM: 194.4
2787
Female, age 85, both hemispheres
260.6
1863
Male, age 55, unknown
243.9
2727
Male, age 61, right hemisphere
235.6
2109
Female, age 72, unknown
229.3
1968
Male, age 76, left hemisphere
187.4
2454
Male, age 74, left hemisphere
182.7
2319
Female, age 91, both hemispheres
110.0
2115
Male, age 80, left hemisphere
105.5
Pontine raphe nucleus nTPM: 206.0
2122
Female, age 85, midline
214.9
2853
Male, age 76, midline
197.1
Posteroventral cochlear nucleus nTPM: 119.0
2752
Female, age 85, both hemispheres
193.5
2070
Male, age 76, both hemispheres
153.0
2371
Male, age 61, both hemispheres
94.4
2135
Female, age 91, both hemispheres
81.7
2341
Male, age 80, both hemispheres
72.7
Principal sensory trigeminal nucleus nTPM: 178.0
2158
Male, age 61, both hemispheres
227.4
2008
Male, age 80, left hemisphere
200.5
2324
Male, age 76, both hemispheres
174.2
2367
Female, age 91, left hemisphere
109.9
Reticular pontine nucleus, caudal nTPM: 143.3
2559
Male, age 74, both hemispheres
159.0
2092
Male, age 76, both hemispheres
157.2
2332
Male, age 80, right hemisphere
154.6
2457
Female, age 91, both hemispheres
102.3
Reticular pontine nucleus, oral nTPM: 160.7
2012
Female, age 85, both hemispheres
201.6
2361
Male, age 74, both hemispheres
198.9
1939
Male, age 80, both hemispheres
166.5
2167
Male, age 76, both hemispheres
133.6
2366
Female, age 91, both hemispheres
102.6
Reticulotegmental nucleus nTPM: 137.2
2325
Male, age 76, both hemispheres
174.7
2452
Male, age 74, both hemispheres
131.6
2333
Male, age 80, both hemispheres
121.3
2322
Female, age 91, both hemispheres
121.1
Spinal trigeminal nucleus, oral nTPM: 191.2
2737
Female, age 85, both hemispheres
217.5
2164
Male, age 80, both hemispheres
196.0
1978
Male, age 76, both hemispheres
160.0
Subcoeruleus area nTPM: 166.4
2323
Female, age 91, left hemisphere
215.9
1958
Male, age 80, both hemispheres
201.5
2089
Male, age 76, left hemisphere
145.8
2451
Male, age 74, both hemispheres
139.6
2369
Female, age 85, left hemisphere
129.0
Superior olive nTPM: 169.5
1875
Female, age 85, both hemispheres
250.4
2364
Male, age 74, right hemisphere
187.7
2020
Male, age 76, both hemispheres
171.6
2329
Male, age 80, right hemisphere
135.6
2561
Female, age 91, both hemispheres
102.2
Ventral periolivary nuclei nTPM: 163.0
2130
Female, age 85, both hemispheres
193.8
2165
Male, age 80, both hemispheres
185.4
2023
Male, age 76, both hemispheres
163.5
2794
Female, age 91, left hemisphere
109.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 150.6
2449
Male, age 74, both hemispheres
193.0
2840
Female, age 85, both hemispheres
174.2
1959
Male, age 76, both hemispheres
157.5
2359
Male, age 61, both hemispheres
153.9
2161
Male, age 80, both hemispheres
138.4
2456
Female, age 91, both hemispheres
86.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
211.1
Pig sample
Sample description
nTPM
Pons nTPM: 211.1
Samples: 4
Max nTPM: 239.3
Min nTPM: 170.5
Sample A
Female
211.6
Sample B
Female
223.0
Sample C
Male
239.3
Sample D
Male
170.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.