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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
109.0
nTPM
HPA Brain:
195.0
nTPM
GTEx:
109.0
nTPM
FANTOM5:
603.6
Scaled Tags Per Million
Pig:
172.3
nTPM
Mouse:
1107.8
nTPM
Allen mouse:
35.3
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
195.0
Sample id
Sample description
nTPM
Amygdala nTPM: 163.3
1987
Female, age 91, left hemisphere
228.8
2814
Male, age 76, right hemisphere
181.2
2517
Female, age 94, left hemisphere
179.5
2514
Male, age 75, right hemisphere
126.4
2695
Female, age 67, right hemisphere
100.5
Basal amygdala nTPM: 188.7
2243
Female, age 91, right hemisphere
266.6
2685
Female, age 94, left hemisphere
233.8
2110
Male, age 80, left hemisphere
202.6
1955
Male, age 76, both hemispheres
176.9
2609
Male, age 75, right hemisphere
137.8
2827
Female, age 67, right hemisphere
114.4
Central amygdala nTPM: 172.4
2239
Male, age 80, left hemisphere
209.3
2701
Female, age 91, right hemisphere
196.3
2826
Female, age 94, left hemisphere
158.9
1905
Male, age 76, both hemispheres
150.8
2515
Male, age 75, right hemisphere
146.7
Corticomedial amygdala nTPM: 195.0
2829
Male, age 80, left hemisphere
267.1
2242
Female, age 91, right hemisphere
228.7
2429
Female, age 94, left hemisphere
212.0
2240
Male, age 76, both hemispheres
177.5
2535
Female, age 67, right hemisphere
169.1
2428
Male, age 75, right hemisphere
115.2
Lateral amygdala nTPM: 149.3
2534
Female, age 94, left hemisphere
238.2
1883
Male, age 76, both hemispheres
175.9
2255
Female, age 91, right hemisphere
154.0
2256
Male, age 80, left hemisphere
135.7
2516
Male, age 75, right hemisphere
107.2
2830
Female, age 67, right hemisphere
84.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
109.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 109.0
Samples: 152
Max nTPM: 396.9
Min nTPM: 3.8
Std nTPM: 71.1
Median nTPM: 93.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
396.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
357.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
322.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
308.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
277.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
271.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
266.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
257.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
242.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
232.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
223.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
220.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
214.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
214.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
207.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
197.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
195.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
192.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
188.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
180.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
178.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
178.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
175.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
173.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
170.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
164.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
162.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
162.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
161.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
158.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
158.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
157.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
156.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
155.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
154.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
142.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
141.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
140.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
138.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
136.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
135.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
134.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
134.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
131.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
131.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
130.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
129.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
123.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
123.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
122.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
122.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
122.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
122.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
122.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
122.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
122.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
121.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
120.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
120.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
119.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
119.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
119.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
118.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
117.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
115.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
111.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
111.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
109.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
108.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
107.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
104.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
103.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
102.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
99.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
97.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
94.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
91.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
90.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
88.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
86.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
85.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
84.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
82.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
81.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
80.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
79.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
78.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
76.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
76.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
76.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
76.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
73.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
73.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
72.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
72.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
71.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
70.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
70.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
70.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
68.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
67.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
65.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
64.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
64.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
64.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
60.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
60.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
59.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
58.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
58.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
57.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
57.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
57.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
56.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
56.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
55.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
54.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
54.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
53.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
52.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
51.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
51.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
50.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
50.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
49.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
48.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
47.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
46.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
45.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
44.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
44.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
44.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
44.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
43.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
43.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
43.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
41.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
39.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
36.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
35.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
34.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
29.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
27.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
26.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
21.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
20.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
16.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
16.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
13.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
9.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
8.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
3.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1107.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 1107.8
Samples: 4
Max nTPM: 1233.9
Min nTPM: 1020.6
Sample A
Male
1233.9
Sample B
Male
1078.8
Sample C
Female
1020.6
Sample D
Female
1097.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.