HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:21.8 nTPM
HPA Brain:19.2 nTPM
GTEx:21.8 nTPM
FANTOM5:22.5 Scaled Tags Per Million
Pig:1.3 nTPM
Mouse:5.2 nTPM
Allen mouse:4.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022436Antibody HPA022967
Glial cells Not detectedLow
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 19.2
Sample id Sample description nTPM
Hippocampus
nTPM: 16.6
2148 Female, age 91, left hemisphere 18.8
1898 Male, age 80, left hemisphere 18.1
2529 Female, age 94, left hemisphere 16.7
2621 Female, age 67, right hemisphere 15.9
1911 Female, age 85, right hemisphere 15.6
1855 Male, age 76, left hemisphere 14.2
Dentate gyrus
nTPM: 18.2
2531 Female, age 67, both hemispheres 20.8
2528 Male, age 74, both hemispheres 19.1
1927 Female, age 91, both hemispheres 19.0
2530 Female, age 94, left hemisphere 18.5
2010 Male, age 76, both hemispheres 16.3
2246 Female, age 85, both hemispheres 15.3
Entorhinal gyrus
nTPM: 19.1
2686 Male, age 75, right hemisphere 20.3
2764 Male, age 80, right hemisphere 20.0
2117 Female, age 91, right hemisphere 19.6
1787 Male, age 76, left hemisphere 18.8
2613 Female, age 94, left hemisphere 18.0
1938 Female, age 85, left hemisphere 17.8
Hippocampus, CA1
nTPM: 17.1
2045 Male, age 76, both hemispheres 19.1
2749 Male, age 80, left hemisphere 17.3
1873 Female, age 85, both hemispheres 16.9
2082 Female, age 91, right hemisphere 16.4
2527 Male, age 74, both hemispheres 15.8
Hippocampus, CA2
nTPM: 17.2
1940 Female, age 85, left hemisphere 18.9
2437 Female, age 94, left hemisphere 18.6
1963 Male, age 80, left hemisphere 17.1
1892 Male, age 76, both hemispheres 16.5
2113 Female, age 91, right hemisphere 16.4
2249 Male, age 74, both hemispheres 15.8
Hippocampus, CA3
nTPM: 19.2
2620 Female, age 94, left hemisphere 27.6
1867 Male, age 76, both hemispheres 18.4
1891 Female, age 85, both hemispheres 17.6
2861 Female, age 67, both hemispheres 17.5
2436 Male, age 74, both hemispheres 17.1
2137 Male, age 80, left hemisphere 17.0
Parahippocampal cortex
nTPM: 18.7
2622 Female, age 67, right hemisphere 20.5
1850 Male, age 80, both hemispheres 19.9
2018 Male, age 76, both hemispheres 19.9
2693 Female, age 94, both hemispheres 19.5
1990 Female, age 91, right hemisphere 19.0
2250 Female, age 67, right hemisphere 18.5
1933 Female, age 85, both hemispheres 17.7
2532 Female, age 72, left hemisphere 17.5
2245 Female, age 91, both hemispheres 17.4
2692 Male, age 74, both hemispheres 17.0
Perirhinal gyrus
nTPM: 18.9
1841 Female, age 85, right hemisphere 20.6
1847 Female, age 91, left hemisphere 19.8
1794 Male, age 80, right hemisphere 19.6
2848 Male, age 76, right hemisphere 17.6
2521 Female, age 94, right hemisphere 16.9
Subiculum
nTPM: 16.7
2729 Female, age 91, right hemisphere 19.0
1977 Female, age 85, both hemispheres 17.5
2042 Male, age 76, both hemispheres 17.5
2619 Male, age 74, both hemispheres 17.2
1901 Male, age 80, both hemispheres 16.3
2438 Female, age 94, left hemisphere 12.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 21.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.8
Samples: 197

Max nTPM: 38.4
Min nTPM: 14.3
Std nTPM: 4.4
Median nTPM: 20.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 38.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 37.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 35.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 35.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 34.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 33.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 32.4
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 31.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 31.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 31.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 30.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 22.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.5
FF:10169-103B7 60 years, female 23.8
FF:10153-102I9 76 years, female 21.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 1.3
Pig sample Sample description nTPM
Subiculum
nTPM: 1.1
Samples: 4

Max nTPM: 1.2
Min nTPM: 0.9
Sample A Female 1.0
Sample B Female 0.9
Sample C Male 1.2
Sample D Male 1.2
Dorsal hippocampus
nTPM: 1.0
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.8
Sample A Female 1.1
Sample B Female 0.9
Sample C Male 1.0
Sample D Male 0.8
Entorhinal cortex
nTPM: 0.9
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.8
Sample A Female 0.9
Sample B Female 0.9
Sample C Male 0.8
Sample D Male 1.0
Ventral hippocampus
nTPM: 1.3
Samples: 4

Max nTPM: 1.6
Min nTPM: 0.9
Sample A Female 1.3
Sample B Female 0.9
Sample C Male 1.6
Sample D Male 1.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 5.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.2
Samples: 4

Max nTPM: 6.9
Min nTPM: 4.3
Sample A Male 5.1
Sample B Male 6.9
Sample C Female 4.3
Sample D Female 4.6
Hippocampal formation
nTPM: 3.9
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.1
Sample A Male 4.9
Sample B Male 3.4
Sample C Female 3.1
Sample D Female 4.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.8
69529167 Antisense, RP_050421_03_F10, Mouse strain C57BL/6J (56 days, male) 4.8

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