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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
284.5
nTPM
FANTOM5:
233.1
Scaled Tags Per Million
Pig:
155.0
nTPM
Allen mouse:
7.1
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
284.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 255.5
2090
Male, age 80, both hemispheres
317.4
2188
Female, age 91, both hemispheres
315.4
2301
Female, age 85, both hemispheres
231.5
1984
Male, age 76, both hemispheres
157.7
Dorsal cochlear nucleus nTPM: 262.7
2802
Male, age 74, right hemisphere
327.9
2187
Female, age 91, both hemispheres
293.4
2378
Male, age 80, both hemispheres
280.8
2370
Male, age 61, both hemispheres
225.2
2058
Male, age 76, both hemispheres
186.0
Dorsal tegmental nucleus nTPM: 205.3
2083
Male, age 80, both hemispheres
271.0
2326
Male, age 74, both hemispheres
250.8
1936
Male, age 76, left hemisphere
166.9
2358
Male, age 61, both hemispheres
132.5
Dorsolateral tegmental area nTPM: 226.4
2751
Female, age 85, both hemispheres
315.5
2654
Male, age 80, both hemispheres
258.5
2337
Male, age 61, both hemispheres
218.0
2360
Male, age 74, both hemispheres
202.8
2141
Male, age 76, both hemispheres
137.0
Kolliker-Fuse nucleus nTPM: 252.8
2793
Female, age 91, left hemisphere
331.1
2315
Male, age 76, right hemisphere
219.7
2163
Male, age 80, both hemispheres
207.5
Lateral lemniscal nuclei nTPM: 237.2
2320
Female, age 91, left hemisphere
287.4
2746
Female, age 85, left hemisphere
267.6
2453
Male, age 74, right hemisphere
251.1
2036
Male, age 80, both hemispheres
218.8
2169
Male, age 76, both hemispheres
161.1
Lateral parabrachial nucleus nTPM: 251.1
2792
Male, age 76, both hemispheres
359.1
2013
Male, age 80, both hemispheres
269.5
2139
Female, age 85, right hemisphere
188.9
2790
Male, age 61, both hemispheres
186.9
Lateral vestibular nucleus nTPM: 213.2
2311
Male, age 80, both hemispheres
237.7
2184
Male, age 76, both hemispheres
188.6
Locus coeruleus nTPM: 147.9
2720
Male, age 74, both hemispheres
171.1
2162
Male, age 80, both hemispheres
162.5
2317
Female, age 72, unknown
160.1
2788
Male, age 74, unknown
152.5
2014
Male, age 55, unknown
141.8
2123
Female, age 91, both hemispheres
135.2
1980
Male, age 76, both hemispheres
112.4
Medial parabrachial nucleus nTPM: 234.5
2170
Female, age 91, both hemispheres
299.8
2463
Female, age 85, right hemisphere
253.5
2854
Male, age 80, both hemispheres
239.2
2786
Male, age 76, both hemispheres
208.9
2156
Male, age 61, both hemispheres
171.3
Medial periolivary nuclei nTPM: 238.1
2081
Male, age 80, both hemispheres
313.6
2791
Male, age 74, right hemisphere
275.3
2458
Female, age 91, both hemispheres
270.1
2063
Male, age 76, both hemispheres
175.4
2171
Female, age 85, both hemispheres
156.2
Motor facial nucleus nTPM: 228.9
2126
Male, age 61, both hemispheres
326.7
2365
Male, age 74, right hemisphere
278.2
2795
Female, age 91, both hemispheres
221.3
2697
Female, age 85, both hemispheres
213.2
2327
Male, age 80, both hemispheres
185.7
2062
Male, age 76, both hemispheres
148.4
Motor trigeminal nucleus nTPM: 234.5
2560
Male, age 74, both hemispheres
290.1
2321
Female, age 91, both hemispheres
286.6
2079
Male, age 80, both hemispheres
201.2
2309
Male, age 76, both hemispheres
199.2
2335
Male, age 61, both hemispheres
195.3
Nuclei of the trapezoid body nTPM: 197.9
2368
Female, age 91, both hemispheres
252.4
2166
Male, age 80, both hemispheres
243.8
2159
Male, age 61, both hemispheres
197.1
1983
Male, age 76, both hemispheres
156.8
2735
Female, age 85, both hemispheres
139.3
Nucleus raphe magnus nTPM: 204.6
2459
Female, age 91, both hemispheres
284.3
2051
Male, age 76, both hemispheres
237.6
2328
Male, age 80, both hemispheres
220.6
2455
Male, age 74, both hemispheres
220.6
2160
Male, age 61, both hemispheres
134.2
2172
Female, age 85, both hemispheres
130.1
Paramedian reticular nucleus nTPM: 238.4
2052
Male, age 76, both hemispheres
270.8
2057
Male, age 80, both hemispheres
262.3
2050
Female, age 85, both hemispheres
214.8
2313
Male, age 61, both hemispheres
205.5
Pedunculopontine tegmental nucleus nTPM: 189.6
2334
Male, age 80, both hemispheres
211.1
1921
Female, age 85, both hemispheres
181.0
2338
Male, age 61, both hemispheres
176.8
Pontine nuclei nTPM: 245.1
2454
Male, age 74, left hemisphere
347.3
2319
Female, age 91, both hemispheres
317.6
2115
Male, age 80, left hemisphere
277.3
2109
Female, age 72, unknown
267.1
1863
Male, age 55, unknown
211.1
1968
Male, age 76, left hemisphere
194.4
2727
Male, age 61, right hemisphere
190.7
2787
Female, age 85, both hemispheres
155.1
Pontine raphe nucleus nTPM: 167.7
2122
Female, age 85, midline
168.6
2853
Male, age 76, midline
166.9
Posteroventral cochlear nucleus nTPM: 284.5
2135
Female, age 91, both hemispheres
386.9
2341
Male, age 80, both hemispheres
358.4
2371
Male, age 61, both hemispheres
255.5
2070
Male, age 76, both hemispheres
231.6
2752
Female, age 85, both hemispheres
190.1
Principal sensory trigeminal nucleus nTPM: 211.8
2367
Female, age 91, left hemisphere
334.6
2008
Male, age 80, left hemisphere
191.2
2324
Male, age 76, both hemispheres
171.1
2158
Male, age 61, both hemispheres
150.5
Reticular pontine nucleus, caudal nTPM: 261.0
2559
Male, age 74, both hemispheres
337.2
2457
Female, age 91, both hemispheres
305.6
2092
Male, age 76, both hemispheres
222.5
2332
Male, age 80, right hemisphere
178.8
Reticular pontine nucleus, oral nTPM: 275.9
2361
Male, age 74, both hemispheres
360.0
2366
Female, age 91, both hemispheres
310.6
1939
Male, age 80, both hemispheres
265.7
2012
Female, age 85, both hemispheres
233.5
2167
Male, age 76, both hemispheres
209.6
Reticulotegmental nucleus nTPM: 227.1
2452
Male, age 74, both hemispheres
282.8
2322
Female, age 91, both hemispheres
255.1
2333
Male, age 80, both hemispheres
227.1
2325
Male, age 76, both hemispheres
143.3
Spinal trigeminal nucleus, oral nTPM: 197.4
2164
Male, age 80, both hemispheres
233.6
1978
Male, age 76, both hemispheres
193.9
2737
Female, age 85, both hemispheres
164.7
Subcoeruleus area nTPM: 232.2
2369
Female, age 85, left hemisphere
375.9
2451
Male, age 74, both hemispheres
218.8
1958
Male, age 80, both hemispheres
210.5
2089
Male, age 76, left hemisphere
189.2
2323
Female, age 91, left hemisphere
166.6
Superior olive nTPM: 241.3
2364
Male, age 74, right hemisphere
266.6
2561
Female, age 91, both hemispheres
258.1
2020
Male, age 76, both hemispheres
250.7
2329
Male, age 80, right hemisphere
238.3
1875
Female, age 85, both hemispheres
192.8
Ventral periolivary nuclei nTPM: 207.6
2023
Male, age 76, both hemispheres
295.6
2794
Female, age 91, left hemisphere
209.1
2165
Male, age 80, both hemispheres
187.6
2130
Female, age 85, both hemispheres
137.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 244.9
2456
Female, age 91, both hemispheres
284.0
2449
Male, age 74, both hemispheres
255.1
2840
Female, age 85, both hemispheres
253.9
2161
Male, age 80, both hemispheres
235.7
2359
Male, age 61, both hemispheres
230.4
1959
Male, age 76, both hemispheres
210.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
155.0
Pig sample
Sample description
nTPM
Pons nTPM: 155.0
Samples: 4
Max nTPM: 221.8
Min nTPM: 120.7
Sample A
Female
221.8
Sample B
Female
125.6
Sample C
Male
120.7
Sample D
Male
151.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.