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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
72.9
nTPM
HPA Brain:
316.1
nTPM
GTEx:
72.9
nTPM
FANTOM5:
505.9
Scaled Tags Per Million
Pig:
192.8
nTPM
Mouse:
80.7
nTPM
Allen mouse:
9.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
316.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 249.0
2019
Male, age 18, unknown
327.5
2411
Female, age 72, unknown
300.9
1830
Male, age 51, unknown
297.0
1833
Male, age 53, unknown
281.0
1870
Female, age 42, unknown
280.9
2666
Male, age 74, left hemisphere
258.2
2828
Female, age 72, unknown
220.1
2586
Male, age 75, left hemisphere
211.2
1827
Male, age 72, unknown
188.9
2219
Male, age 76, both hemispheres
123.8
Dorsal raphe nucleus nTPM: 184.6
2750
Male, age 76, both hemispheres
262.6
2016
Female, age 72, unknown
192.6
1828
Male, age 53, unknown
188.0
2047
Male, age 72, unknown
146.3
2298
Female, age 72, unknown
133.6
Inferior colliculus nTPM: 172.0
1890
Male, age 53, unknown
188.4
1848
Female, age 42, unknown
177.0
2097
Female, age 72, unknown
173.2
2849
Male, age 72, unknown
149.5
Median raphe nucleus nTPM: 159.6
2220
Male, age 76, midline
159.6
Periaquaductal grey, anterior nTPM: 158.8
2502
Female, age 75, unknown
178.9
1947
Male, age 18, unknown
162.8
1795
Male, age 51, unknown
134.6
Periaquaductal grey, dorsal nTPM: 142.2
2464
Female, age 72, unknown
194.8
1831
Male, age 72, unknown
151.4
2850
Male, age 76, both hemispheres
121.5
1840
Male, age 53, unknown
101.1
Periaquaductal grey, lateral nTPM: 157.2
2272
Male, age 74, both hemispheres
174.6
2053
Male, age 18, unknown
160.1
2140
Male, age 76, both hemispheres
136.9
Pretectal area nTPM: 185.0
1815
Male, age 53, unknown
238.5
2007
Male, age 72, unknown
214.8
1817
Female, age 42, unknown
206.6
2316
Male, age 76, right hemisphere
202.3
2407
Male, age 75, both hemispheres
202.3
2273
Male, age 74, both hemispheres
177.0
2667
Female, age 75, unknown
171.9
1944
Female, age 72, unknown
161.8
2825
Male, age 18, unknown
161.8
1816
Male, age 51, unknown
155.9
2224
Female, age 72, unknown
141.5
Red nucleus nTPM: 316.1
1904
Male, age 53, unknown
372.9
1865
Male, age 51, unknown
366.4
1821
Female, age 72, unknown
364.2
2785
Male, age 18, unknown
341.7
2227
Male, age 72, unknown
329.7
2769
Male, age 72, unknown
327.1
2823
Male, age 76, right hemisphere
312.2
2503
Female, age 72, unknown
309.1
2588
Male, age 74, left hemisphere
300.0
1954
Female, age 42, unknown
295.4
2584
Male, age 75, left hemisphere
255.8
2725
Female, age 75, unknown
218.8
Substantia nigra nTPM: 207.1
2583
Male, age 75, right hemisphere
263.3
2409
Female, age 72, unknown
253.9
2590
Female, age 75, unknown
234.9
1889
Female, age 72, unknown
226.4
1851
Male, age 51, unknown
221.7
2241
Male, age 72, unknown
200.4
2665
Male, age 74, both hemispheres
176.9
2699
Male, age 18, unknown
169.6
1941
Male, age 53, unknown
167.6
1916
Female, age 42, unknown
156.6
Superior colliculus nTPM: 214.6
1913
Female, age 42, unknown
305.4
1995
Male, age 72, unknown
268.3
2587
Male, age 74, left hemisphere
257.0
2668
Female, age 75, unknown
243.5
1839
Male, age 51, unknown
203.3
1895
Male, age 76, right hemisphere
194.4
1796
Male, age 53, unknown
182.5
2261
Male, age 18, unknown
180.8
2087
Female, age 72, unknown
167.1
2664
Male, age 75, both hemispheres
143.7
Ventral tegmental area nTPM: 215.2
2223
Female, age 72, unknown
295.4
2410
Female, age 72, unknown
269.7
2021
Male, age 53, unknown
191.1
1942
Male, age 51, unknown
188.7
2218
Male, age 76, both hemispheres
173.3
1915
Female, age 42, unknown
173.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
72.9
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 72.9
Samples: 139
Max nTPM: 223.5
Min nTPM: 28.6
Std nTPM: 31.9
Median nTPM: 66.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
223.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
199.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
180.9
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
172.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
151.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
137.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
135.5
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
131.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
130.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
125.6
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
125.5
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
121.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
117.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
106.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
102.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
101.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
99.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
97.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
96.7
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
95.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
95.4
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
94.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
94.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
92.7
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
92.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
91.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
90.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
90.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
89.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
89.1
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
88.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
88.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
87.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
87.4
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
87.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
85.8
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
83.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
83.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
83.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
83.0
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
82.9
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
82.1
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
81.3
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
81.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
80.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
79.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
77.7
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
77.2
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
76.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
75.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
74.4
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
72.9
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
72.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
72.3
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
72.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
71.4
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
71.2
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
71.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
71.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
70.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
70.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
70.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
69.8
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
67.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
67.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
67.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
67.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
67.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
66.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
66.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
65.9
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
65.7
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
64.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
64.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
63.9
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
63.8
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
63.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
63.0
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
62.8
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
61.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
61.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
61.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
61.5
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
60.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
60.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
59.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
59.6
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
59.5
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
58.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
58.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
58.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
57.7
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
57.2
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
56.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
55.9
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
55.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
54.9
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
54.4
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
53.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
52.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
51.3
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
51.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
51.2
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
51.1
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
51.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
50.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
50.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
50.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
49.8
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
48.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
48.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
48.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
47.5
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
47.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
46.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
46.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
45.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
45.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
45.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
45.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
44.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
44.3
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
43.8
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
43.6
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
43.3
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
43.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
41.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
41.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
40.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
39.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
39.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
38.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
37.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
36.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
35.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
34.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
34.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
33.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
28.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
80.7
Mouse sample
Sample description
nTPM
Midbrain nTPM: 80.7
Samples: 4
Max nTPM: 91.7
Min nTPM: 67.1
Sample A
Male
67.1
Sample B
Male
81.4
Sample C
Female
91.7
Sample D
Female
82.4
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.