Expression of TPT1 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

TPT1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 2675.44

Median expressionⁱ : 2707.42

Median follow up timeⁱ : 1.63

P scoreⁱ 0.031

5-year survival highⁱ 54%

5-year survival lowⁱ 43%

TCGA RNA samplesⁱ

Average TPM

2821.2

Number of samples

362

Samples

Sample	Description	TPM
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	7394.0
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	6337.6
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	6177.8
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	6024.5
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	5873.6
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	5414.4
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	5404.8
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	5338.4
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	5276.2
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	5261.0
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	5260.2
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	5168.5
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	5130.7
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	5051.3
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	4987.0
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	4967.7
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	4935.4
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	4877.0
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	4873.8
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	4870.6
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	4864.6
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	4840.0
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	4836.1
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	4728.2
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	4700.7
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	4670.5
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	4645.9
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	4615.9
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	4615.1
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	4593.6
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	4566.2
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	4504.2
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	4481.0
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	4478.9
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	4462.8
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	4436.9
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	4388.7
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	4346.7
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	4335.5
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	4328.3
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	4275.8
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	4265.3
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	4259.8
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	4254.5
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	4248.2
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	4206.7
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	4148.8
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	4130.3
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	4127.7
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	4116.8
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	4108.4
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	4094.3
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	4084.6
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	4073.5
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	4057.7
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	4034.0
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	4026.7
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	4017.7
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	4012.2
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	4003.0
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	4001.5
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	3997.6
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	3977.0
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	3898.9
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	3893.1
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	3879.6
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	3877.8
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	3875.4
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	3862.3
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	3841.1
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	3837.6
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	3824.3
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	3820.2
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	3768.3
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	3765.7
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	3754.8
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	3748.4
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	3729.1
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	3727.8
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	3684.0
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	3669.2
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	3663.5
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	3644.4
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	3635.2
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	3633.8
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	3632.9
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	3614.1
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	3612.1
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	3597.4
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	3593.6
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	3593.0
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	3586.8
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	3537.8
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	3530.4
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	3525.5
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	3497.8
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	3494.1
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	3485.5
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	3485.3
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	3473.6
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	3467.3
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	3464.8
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	3453.7
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	3449.4
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	3438.4
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	3415.5
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	3368.8
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	3368.0
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	3363.7
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	3361.7
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	3348.9
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	3338.6
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	3318.5
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	3318.5
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	3309.1
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	3293.1
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	3259.7
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	3243.1
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	3240.8
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	3238.0
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	3237.2
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	3234.2
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	3221.9
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	3220.2
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	3209.8
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	3205.5
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	3203.5
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	3200.8
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	3190.4
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	3189.9
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	3187.6
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	3181.7
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	3151.1
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	3122.7
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	3119.2
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	3119.1
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	3118.1
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	3099.5
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	3095.6
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	3080.3
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	3075.6
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	3053.7
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	3031.3
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	3019.3
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	3010.9
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	2993.7
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	2988.0
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	2978.8
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	2974.5
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	2958.0
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	2955.1
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	2946.2
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	2943.1
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	2924.9
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	2904.4
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	2899.6
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	2893.4
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	2891.9
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	2875.3
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	2847.5
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	2836.3
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	2824.9
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	2823.9
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	2821.1
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	2812.3
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	2807.9
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	2807.6
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	2802.1
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	2795.2
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	2787.8
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	2783.0
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	2761.7
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	2757.6
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	2750.9
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	2747.2
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	2742.0
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	2733.4
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	2727.8
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	2716.6
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	2708.6
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	2707.9
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	2706.9
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	2696.8
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	2686.1
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	2682.9
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	2675.9
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	2675.0
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	2671.1
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	2659.8
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	2654.9
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	2646.9
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	2622.0
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	2617.1
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	2613.1
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	2608.9
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	2579.6
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	2575.6
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	2572.0
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	2563.0
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	2559.7
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	2556.4
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	2518.8
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	2515.3
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	2505.0
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	2504.4
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	2480.1
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	2479.4
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	2459.3
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	2448.1
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	2447.8
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	2435.9
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	2425.2
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	2422.2
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	2419.7
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	2401.6
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	2374.4
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	2372.4
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	2371.1
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	2348.7
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	2340.1
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	2333.4
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	2309.6
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	2307.9
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	2305.0
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	2300.9
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	2297.9
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	2282.0
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	2277.1
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	2250.7
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	2233.2
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	2229.6
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	2215.9
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	2215.8
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	2214.2
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	2212.5
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	2206.4
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	2200.1
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	2199.6
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	2198.0
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	2197.7
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	2196.2
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	2165.3
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	2150.9
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	2145.8
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	2139.1
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	2135.0
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	2132.4
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	2131.4
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	2111.0
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	2109.6
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	2100.2
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	2079.4
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	2072.0
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	2063.6
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	2059.8
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	2042.9
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	2019.1
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	2014.7
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	2013.1
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	2004.8
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	1973.9
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	1972.7
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	1970.0
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	1966.7
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	1962.5
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	1955.7
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	1948.5
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	1942.5
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	1923.9
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	1920.6
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	1918.1
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	1911.0
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	1905.3
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	1886.7
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	1884.9
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	1881.7
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	1870.8
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	1865.3
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	1863.2
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	1862.7
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	1839.5
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	1834.5
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	1811.4
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	1795.5
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	1789.9
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	1788.2
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	1788.1
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	1783.0
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	1765.0
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	1762.9
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	1757.9
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	1741.4
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	1738.0
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	1737.6
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	1712.1
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	1701.4
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	1696.6
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	1694.1
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	1676.6
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	1671.0
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	1669.6
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	1667.6
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	1661.7
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	1661.7
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	1658.8
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	1622.6
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	1621.1
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	1603.7
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	1602.4
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	1592.9
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	1581.7
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	1581.4
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	1575.8
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	1571.3
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	1570.8
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	1547.9
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	1535.9
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	1526.6
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	1519.3
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	1517.9
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	1506.4
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	1504.9
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	1490.8
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	1482.8
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	1449.7
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	1444.2
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	1407.6
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	1398.6
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	1397.7
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	1378.9
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	1363.1
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	1339.9
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	1338.3
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	1333.9
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	1322.8
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	1320.5
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	1305.9
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	1301.4
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	1283.1
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	1276.9
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	1270.4
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	1267.9
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	1239.2
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	1237.8
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	1221.7
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	1202.9
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	1202.6
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	1181.8
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	1123.2
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	1119.3
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	1114.7
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	1100.7
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	1096.6
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	1092.1
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	1076.4
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	1050.0
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	1044.7
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	1001.8
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	898.5
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	812.8
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	748.2
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	658.4
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

TPT1 is not prognostic in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 4603.78

Median expressionⁱ : 3404.93

Median follow up timeⁱ : 2.14

P scoreⁱ 0.0075

5-year survival highⁱ 0%

5-year survival lowⁱ 67%

TCGA RNA samplesⁱ

Average TPM

3475.1

Number of samples

231

Samples

Sample	Description	TPM
DO48715	58 years, female, NA, stage:2, dead, 690 days	7756.5
DO48682	72 years, female, NA, stage:3, dead, 120 days	7648.6
DO45303	62 years, female, NA, stage:3, alive, 990 days	7523.8
DO45285	59 years, male, NA, stage:3, alive, 480 days	7150.4
DO48751	68 years, male, NA, stage:2, dead, 480 days	6923.7
DO45183	72 years, female, NA, stage:2, dead, 570 days	6817.4
DO45193	68 years, female, NA, stage:4, dead, 120 days	6727.1
DO45305	66 years, male, NA, stage:4, alive, 300 days	6713.4
DO23530	53 years, male, NA, stage:4, dead, 180 days	6485.2
DO45189	85 years, female, NA, stage:2, alive, 1200 days	6361.8
DO50859	77 years, male, NA, stage:2, alive, 180 days	6312.0
DO45239	42 years, male, NA, stage:2, alive, 870 days	6210.9
DO45221	75 years, female, NA, stage:4, dead, 390 days	6169.3
DO45265	73 years, male, NA, stage:3, alive, 1020 days	5733.6
DO45277	64 years, male, NA, stage:3, alive, 600 days	5583.0
DO45165	75 years, male, NA, stage:2, alive, 690 days	5482.9
DO45247	31 years, female, NA, stage:2, alive, 210 days	5457.6
DO23543	63 years, male, NA, stage:2, alive, 1020 days	5304.9
DO48737	52 years, male, NA, stage:1, alive, 720 days	5294.5
DO50814	83 years, male, NA, stage:3, alive, 420 days	5289.1
DO23528	45 years, female, NA, stage:2, alive, 1020 days	5266.5
DO23516	69 years, male, NA, stage:3, dead, 20 days	5256.3
DO23551	73 years, male, NA, stage:3, dead, 150 days	5184.1
DO48697	64 years, female, NA, stage:2, dead, 810 days	5142.9
DO48672	81 years, male, NA, stage:2, alive, 450 days	5142.6
DO45187	32 years, female, NA, stage:1, alive, 1260 days	5108.3
DO50802	49 years, male, NA, stage:2, alive, 930 days	5106.7
DO45251	57 years, female, NA, stage:2, alive, 900 days	5099.7
DO45191	61 years, female, NA, stage:2, alive, 1200 days	5071.9
DO23537	79 years, male, NA, stage:2, dead, 900 days	5054.8
DO48677	58 years, male, NA, stage:3, alive, 1140 days	5036.1
DO227643	79 years, male, NA, stage:2, alive, 1260 days	4945.6
DO50822	66 years, male, NA, stage:2, alive, 510 days	4941.4
DO50813	56 years, male, NA, stage:2, alive, 420 days	4849.3
DO45279	67 years, male, NA, stage:3, alive, 1290 days	4846.4
DO45175	74 years, male, NA, stage:2, alive, 1140 days	4829.0
DO48736	76 years, female, NA, stage:1, alive, 600 days	4811.9
DO50857	72 years, male, NA, stage:2, alive, 210 days	4763.2
DO45307	54 years, female, NA, stage:4, dead, 240 days	4727.6
DO48719	80 years, male, NA, stage:2, alive, 690 days	4718.8
DO45203	71 years, female, NA, stage:2, alive, 1170 days	4680.2
DO45255	81 years, male, NA, stage:3, alive, 720 days	4669.2
DO45093	71 years, male, NA, stage:2, dead, 720 days	4663.3
DO45229	74 years, male, NA, stage:1, alive, 990 days	4642.7
DO50839	47 years, female, NA, stage:3, alive, 330 days	4628.2
DO45289	78 years, female, NA, stage:3, alive, 360 days	4615.8
DO48725	66 years, male, NA, stage:1, alive, 780 days	4605.9
DO23536	56 years, male, NA, stage:2, alive, 930 days	4601.7
DO45135	77 years, male, NA, stage:1, alive, 1410 days	4567.5
DO45219	78 years, male, NA, stage:2, alive, 1080 days	4471.8
DO50800	74 years, male, NA, stage:2, alive, 510 days	4401.6
DO45287	74 years, male, NA, stage:1, alive, 390 days	4395.3
DO45095	66 years, male, NA, stage:2, alive, 1620 days	4369.5
DO48706	72 years, male, NA, stage:2, alive, 870 days	4362.4
DO48730	73 years, female, NA, stage:2, alive, 630 days	4358.9
DO45261	74 years, male, NA, stage:3, alive, 990 days	4332.2
DO48747	62 years, male, NA, stage:3, alive, 540 days	4329.8
DO23515	71 years, male, NA, stage:2, alive, 1230 days	4306.8
DO45243	74 years, female, NA, stage:3, alive, 930 days	4290.0
DO50820	77 years, female, NA, stage:3, alive, 510 days	4274.6
DO45177	81 years, female, NA, stage:3, alive, 1260 days	4271.7
DO23538	67 years, male, NA, stage:2, alive, 450 days	4271.3
DO45267	73 years, male, NA, stage:3, dead, 570 days	4256.4
DO45141	73 years, male, NA, stage:2, alive, 1320 days	4222.9
DO48674	80 years, male, NA, stage:2, alive, 1260 days	4217.0
DO45231	84 years, male, NA, stage:2, alive, 930 days	4214.0
DO48746	76 years, male, NA, stage:3, alive, 570 days	4182.6
DO48727	81 years, female, NA, stage:2, dead, 390 days	4168.3
DO45103	47 years, male, NA, stage:3, alive, 450 days	4151.8
DO50789	73 years, female, NA, stage:2, alive, 570 days	4139.3
DO45201	49 years, male, NA, stage:1, alive, 900 days	4128.7
DO45109	63 years, male, NA, stage:2, alive, 1590 days	4115.6
DO45241	49 years, male, NA, stage:1, alive, 1080 days	4110.1
DO50774	68 years, female, NA, stage:2, alive, 720 days	4089.5
DO45283	60 years, male, NA, stage:3, alive, 510 days	4049.2
DO45281	83 years, male, NA, stage:4, alive, 750 days	4026.5
DO45157	62 years, male, NA, stage:2, alive, 1980 days	4025.5
DO23533	61 years, male, NA, stage:2, alive, 900 days	3990.0
DO48759	73 years, male, NA, stage:3, alive, 720 days	3983.2
DO48728	74 years, female, NA, stage:2, alive, 150 days	3963.8
DO23517	62 years, male, NA, stage:2, alive, 1200 days	3927.8
DO50811	62 years, male, NA, stage:1, alive, 450 days	3868.7
DO23542	66 years, male, NA, stage:3, alive, 960 days	3866.9
DO45097	69 years, male, NA, stage:3, alive, 1620 days	3840.8
DO50783	62 years, male, NA, stage:3, alive, 480 days	3800.7
DO45181	84 years, female, NA, stage:2, alive, 1200 days	3777.4
DO23549	74 years, male, NA, stage:3, alive, 990 days	3775.9
DO50778	60 years, male, NA, stage:4, alive, 630 days	3760.7
DO50815	62 years, male, NA, stage:3, alive, 150 days	3746.5
DO45145	78 years, male, NA, stage:3, dead, 60 days	3746.1
DO50805	72 years, male, NA, stage:2, alive, 690 days	3725.5
DO23544	67 years, male, NA, stage:2, alive, 960 days	3717.9
DO48721	58 years, female, NA, stage:1, alive, 900 days	3715.9
DO50799	66 years, female, NA, stage:2, alive, 540 days	3699.4
DO50804	81 years, male, NA, stage:2, alive, 720 days	3663.3
DO45143	69 years, male, NA, stage:3, alive, 1290 days	3646.8
DO45297	61 years, female, NA, stage:4, dead, 1260 days	3639.4
DO48681	57 years, male, NA, stage:2, alive, 900 days	3639.3
DO23514	64 years, male, NA, stage:2, alive, 1290 days	3636.5
DO48733	72 years, male, NA, stage:2, alive, 600 days	3621.0
DO45259	65 years, male, NA, stage:3, alive, 330 days	3611.9
DO48693	71 years, male, NA, stage:2, alive, 900 days	3609.2
DO23548	78 years, female, NA, stage:1, alive, 840 days	3571.0
DO23541	65 years, male, NA, stage:2, alive, 930 days	3557.0
DO23512	60 years, male, NA, stage:1, alive, 1260 days	3535.8
DO227801	77 years, female, NA, stage:1, alive, 660 days	3519.4
DO45129	61 years, male, NA, stage:3, alive, 1470 days	3511.2
DO45195	62 years, male, NA, stage:1, alive, 390 days	3508.8
DO45099	46 years, male, NA, stage:3, alive, 1590 days	3504.5
DO45119	74 years, male, NA, stage:3, dead, 510 days	3489.8
DO23531	78 years, female, NA, stage:3, alive, 900 days	3475.8
DO45273	62 years, male, NA, stage:2, alive, 480 days	3468.7
DO45091	56 years, male, NA, stage:2, dead, 1320 days	3464.0
DO50809	56 years, male, NA, stage:3, dead, 720 days	3458.3
DO45111	74 years, male, NA, stage:2, alive, 1590 days	3421.2
DO23545	67 years, male, NA, stage:2, dead, 570 days	3404.9
DO50855	47 years, male, NA, stage:2, alive, 570 days	3340.7
DO45249	57 years, male, NA, stage:1, alive, 630 days	3330.3
DO50808	68 years, male, NA, stage:2, alive, 570 days	3285.4
DO45127	73 years, male, NA, stage:3, dead, 420 days	3281.6
DO23535	67 years, male, NA, stage:1, alive, 960 days	3246.7
DO50850	74 years, male, NA, stage:3, alive, 720 days	3232.8
DO45163	76 years, male, NA, stage:2, alive, 960 days	3223.2
DO45173	63 years, male, NA, stage:3, alive, 1170 days	3194.5
DO45213	58 years, male, NA, stage:1, alive, 1200 days	3193.2
DO45169	74 years, male, NA, stage:3, alive, 1350 days	3180.7
DO48757	68 years, female, NA, stage:3, alive, 480 days	3175.7
DO48720	62 years, female, NA, stage:2, alive, 570 days	3173.3
DO45171	56 years, male, NA, stage:3, alive, 600 days	3148.3
DO50787	63 years, male, NA, stage:3, alive, 480 days	3139.0
DO48760	70 years, female, NA, stage:2, alive, 690 days	3088.6
DO50818	65 years, male, NA, stage:2, alive, 510 days	3085.4
DO45199	86 years, female, NA, stage:2, alive, 1350 days	3082.1
DO45133	64 years, male, NA, stage:3, dead, 660 days	3070.4
DO48712	50 years, male, NA, stage:2, alive, 810 days	3044.0
DO45137	38 years, male, NA, stage:1, alive, 1320 days	3026.5
DO45223	67 years, male, NA, stage:4, alive, 1020 days	2976.7
DO23523	52 years, male, NA, stage:3, alive, 1080 days	2972.1
DO48695	77 years, male, NA, stage:2, alive, 720 days	2971.1
DO45217	69 years, female, NA, stage:3, dead, 270 days	2968.6
DO45139	63 years, male, NA, stage:3, alive, 1320 days	2960.5
DO45215	65 years, male, NA, stage:2, alive, 1170 days	2950.1
DO45245	75 years, female, NA, stage:2, dead, 240 days	2939.0
DO48732	73 years, male, NA, stage:3, alive, 630 days	2907.9
DO45233	83 years, male, NA, stage:3, alive, 900 days	2895.4
DO23547	74 years, male, NA, stage:1, alive, 1020 days	2888.9
DO23529	72 years, male, NA, stage:4, alive, 930 days	2861.3
DO50798	77 years, male, NA, stage:3, dead, 30 days	2833.8
DO50803	62 years, female, NA, stage:1, alive, 540 days	2825.6
DO23534	60 years, male, NA, stage:2, alive, 840 days	2815.3
DO23527	72 years, male, NA, stage:1, alive, 1050 days	2789.2
DO45149	70 years, female, NA, stage:2, alive, 1260 days	2776.2
DO23525	71 years, male, NA, stage:4, alive, 1050 days	2761.0
DO50806	70 years, male, NA, stage:4, alive, 540 days	2759.8
DO48700	78 years, female, NA, stage:2, alive, 810 days	2750.2
DO23519	65 years, male, NA, stage:3, alive, 630 days	2748.8
DO23546	63 years, male, NA, stage:2, alive, 1050 days	2746.1
DO45205	67 years, female, NA, stage:2, dead, 90 days	2741.7
DO50819	72 years, female, NA, stage:2, alive, 510 days	2732.3
DO45179	78 years, female, NA, stage:2, alive, 600 days	2716.4
DO45299	70 years, female, NA, stage:1, alive, 1440 days	2716.4
DO45185	89 years, male, NA, stage:2, alive, 600 days	2649.7
DO45096	69 years, male, NA, stage:2, dead, 1290 days	2647.8
DO45159	65 years, male, NA, stage:3, alive, 1470 days	2613.5
DO45123	78 years, female, NA, stage:2, dead, 570 days	2610.3
DO45094	76 years, male, NA, stage:3, alive, 1650 days	2609.5
DO45101	63 years, male, NA, stage:2, alive, 1680 days	2606.3
DO50793	76 years, male, NA, stage:4, alive, 540 days	2573.7
DO45197	51 years, male, NA, stage:2, alive, 1170 days	2570.9
DO23550	69 years, male, NA, stage:1, alive, 990 days	2563.2
DO45211	76 years, male, NA, stage:3, alive, 240 days	2519.3
DO45253	50 years, male, NA, stage:2, alive, 870 days	2511.4
DO23518	67 years, male, NA, stage:2, alive, 1320 days	2463.6
DO48704	68 years, female, NA, stage:3, alive, 750 days	2437.0
DO50791	79 years, female, NA, stage:1, dead, 480 days	2407.1
DO45225	69 years, male, NA, stage:1, alive, 1050 days	2389.0
DO50840	49 years, male, NA, stage:2, alive, 330 days	2363.0
DO45227	57 years, female, NA, stage:2, alive, 1020 days	2308.4
DO45115	81 years, male, NA, stage:2, alive, 840 days	2292.5
DO50825	70 years, male, NA, stage:2, alive, 390 days	2230.4
DO50817	75 years, male, NA, stage:2, alive, 390 days	2227.6
DO45113	58 years, male, NA, stage:3, alive, 1560 days	2215.8
DO48742	76 years, male, NA, stage:2, alive, 600 days	2196.5
DO45117	73 years, female, NA, stage:2, dead, 1110 days	2185.7
DO45121	61 years, male, NA, stage:3, alive, 1530 days	2185.1
DO45131	53 years, male, NA, stage:4, dead, 360 days	2176.1
DO23510	80 years, female, NA, stage:2, alive, 870 days	2159.5
DO45161	74 years, male, NA, stage:2, dead, 540 days	2129.8
DO48701	78 years, male, NA, stage:2, alive, 780 days	2111.7
DO50816	63 years, male, NA, stage:2, alive, 390 days	2100.0
DO48741	64 years, male, NA, stage:3, alive, 240 days	2095.7
DO50844	75 years, male, NA, stage:4, alive, 300 days	2093.5
DO48716	71 years, male, NA, stage:2, alive, 720 days	2085.6
DO48743	69 years, female, NA, stage:2, alive, 570 days	2072.5
DO45269	59 years, male, NA, stage:3, alive, 750 days	2069.4
DO23508	79 years, female, NA, stage:2, alive, 390 days	2052.6
DO45107	63 years, female, NA, stage:2, alive, 1710 days	2045.9
DO45235	68 years, female, NA, stage:1, alive, 900 days	2044.9
DO50785	37 years, male, NA, stage:4, dead, 90 days	2029.7
DO50776	75 years, male, NA, stage:1, alive, 690 days	2026.8
DO45153	77 years, female, NA, stage:2, alive, 1380 days	2023.2
DO45207	68 years, male, NA, stage:1, alive, 1050 days	2009.0
DO45263	67 years, male, NA, stage:3, dead, 270 days	1968.6
DO48717	54 years, male, NA, stage:4, dead, 180 days	1912.7
DO50829	78 years, male, NA, stage:3, alive, 570 days	1908.5
DO23526	66 years, male, NA, stage:3, alive, 1050 days	1860.1
DO45125	58 years, male, NA, stage:3, alive, 1680 days	1829.3
DO50832	73 years, male, NA, stage:3, alive, 90 days	1829.0
DO45092	62 years, male, NA, stage:4, dead, 1200 days	1827.2
DO45209	70 years, male, NA, stage:4, alive, 1350 days	1817.0
DO45155	69 years, male, NA, stage:2, alive, 2160 days	1803.4
DO45301	56 years, male, NA, stage:2, dead, 1440 days	1799.2
DO48723	73 years, male, NA, stage:1, alive, 600 days	1750.0
DO23539	77 years, male, NA, stage:1, alive, 1110 days	1746.2
DO48761	55 years, male, NA, stage:2, alive, 870 days	1704.3
DO45167	67 years, male, NA, stage:2, dead, 1440 days	1698.6
DO23524	71 years, female, NA, stage:2, alive, 1050 days	1683.3
DO48679	72 years, male, NA, stage:2, alive, 1200 days	1672.4
DO45257	46 years, male, NA, stage:3, alive, 810 days	1616.4
DO50807	67 years, male, NA, stage:1, alive, 540 days	1587.7
DO23521	63 years, male, NA, stage:3, alive, 1110 days	1552.1
DO45237	58 years, male, NA, stage:2, alive, 900 days	1489.0
DO45105	61 years, male, NA, stage:1, alive, 1680 days	1313.8
DO45275	65 years, male, NA, stage:3, dead, 10 days	1274.2
DO23513	76 years, male, NA, stage:3, alive, 1200 days	1270.1
DO50845	72 years, male, NA, stage:3, alive, 210 days	1264.0
DO23509	60 years, male, NA, stage:3, dead, 780 days	1061.3
DO23552	80 years, female, NA, stage:1, alive, 810 days	1013.8
DO23532	71 years, female, NA, stage:1, alive, 960 days	849.1
DO23511	83 years, female, NA, stage:3, dead, 180 days	819.9
DO23540	73 years, male, NA, stage:1, alive, 750 days	657.3
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LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
411	Tumor	1.0
1027	Tumor	0.8
627	Tumor	0.8
663	Tumor	0.8
661	Tumor	0.7
297	Tumor	0.7
368	Normal	0.7
615	Tumor	0.7
257	Tumor	0.7
435	Tumor	0.6
951	Tumor	0.6
537	Tumor	0.6
232	Normal	0.5
357	Tumor	0.5
271	Tumor	0.5
467	Tumor	0.5
743	Tumor	0.5
191	Tumor	0.5
365	Tumor	0.5
135	Tumor	0.5
353	Tumor	0.5
642	Normal	0.5
955	Tumor	0.5
313	Tumor	0.4
777	Tumor	0.4
145	Tumor	0.4
258	Normal	0.4
1031	Tumor	0.4
376	Normal	0.4
262	Normal	0.4
227	Tumor	0.4
641	Tumor	0.4
375	Tumor	0.4
1043	Tumor	0.4
1026	Normal	0.4
617	Tumor	0.4
298	Normal	0.4
721	Tumor	0.4
113	Tumor	0.4
536	Normal	0.4
188	Normal	0.4
983	Tumor	0.4
432	Normal	0.4
137	Tumor	0.4
937	Tumor	0.4
423	Tumor	0.4
114	Normal	0.4
392	Normal	0.4
713	Tumor	0.4
981	Tumor	0.4
277	Tumor	0.4
362	Normal	0.4
963	Tumor	0.4
394	Normal	0.4
187	Tumor	0.4
1022	Normal	0.3
111	Normal	0.3
944	Normal	0.3
451	Tumor	0.3
1013	Tumor	0.3
125	Tumor	0.3
231	Tumor	0.3
917	Tumor	0.3
112	Tumor	0.3
1025	Tumor	0.3
395	Tumor	0.3
697	Tumor	0.3
386	Normal	0.3
186	Normal	0.3
664	Normal	0.3
434	Normal	0.3
1042	Normal	0.3
272	Normal	0.3
515	Tumor	0.3
436	Normal	0.3
366	Normal	0.3
618	Normal	0.3
384	Normal	0.3
388	Normal	0.3
127	Tumor	0.3
148	Normal	0.3
396	Normal	0.3
267	Tumor	0.3
342	Normal	0.3
568	Normal	0.3
196	Normal	0.3
953	Tumor	0.3
815	Tumor	0.3
162	Normal	0.3
314	Normal	0.3
361	Tumor	0.3
636	Normal	0.3
1041	Tumor	0.3
351	Tumor	0.3
628	Normal	0.3
724	Normal	0.3
912	Normal	0.3
924	Normal	0.3
358	Normal	0.3
327	Tumor	0.3
666	Normal	0.3
126	Normal	0.3
938	Normal	0.2
698	Normal	0.2
456	Normal	0.2
218	Normal	0.2
557	Tumor	0.2
573	Tumor	0.2
616	Normal	0.2
311	Tumor	0.2
446	Normal	0.2
421	Tumor	0.2
385	Tumor	0.2
426	Normal	0.2
926	Normal	0.2
1032	Normal	0.2
943	Tumor	0.2
214	Normal	0.2
696	Normal	0.2
444	Normal	0.2
851	Tumor	0.2
352	Normal	0.2
331	Tumor	0.2
422	Normal	0.2
662	Normal	0.2
344	Normal	0.2
217	Tumor	0.2
124	Normal	0.2
648	Normal	0.2
222	Normal	0.2
332	Normal	0.2
195	Tumor	0.2
968	Normal	0.2
672	Normal	0.2
136	Normal	0.2
1044	Normal	0.2
172	Normal	0.2
952	Normal	0.2
665	Tumor	0.2
161	Tumor	0.2
742	Normal	0.2
448	Normal	0.2
147	Tumor	0.2
915	Tumor	0.2
268	Normal	0.2
714	Normal	0.2
481	Tumor	0.2
447	Tumor	0.2
387	Tumor	0.2
918	Normal	0.2
132	Normal	0.2
1015	Tumor	0.2
424	Normal	0.1
433	Tumor	0.1
786	Normal	0.1
1046	Normal	0.1
427	Tumor	0.1
1028	Normal	0.1
817	Tumor	0.1
138	Normal	0.1
911	Tumor	0.1
461	Tumor	0.1
383	Tumor	0.1
1021	Tumor	0.1
213	Tumor	0.1
413	Tumor	0.1
223	Tumor	0.1
965	Tumor	0.1
564	Normal	0.1
312	Normal	0.1
414	Normal	0.1
964	Normal	0.1
868	Normal	0.1
916	Normal	0.1
354	Normal	0.1
464	Normal	0.1
367	Tumor	0.1
278	Normal	0.1
956	Normal	0.1
286	Normal	0.1
574	Normal	0.1
814	Normal	0.1
866	Normal	0.1
393	Tumor	0.1
261	Tumor	0.1
452	Normal	0.1
954	Normal	0.1
468	Normal	0.1
873	Tumor	0.0
428	Normal	0.0
462	Normal	0.0
343	Tumor	0.0
966	Normal	0.0
482	Normal	0.0
922	Normal	0.0
862	Normal	0.0
443	Tumor	0.0
647	Tumor	0.0
524	Normal	0.0
1014	Normal	0.0
745	Tumor	0.0
415	Tumor	0.0
818	Normal	0.0
192	Normal	0.0
686	Normal	0.0
518	Normal	0.0
185	Tumor	0.0
546	Normal	0.0
864	Normal	0.0
341	Tumor	0.0
484	Normal	0.0
171	Tumor	0.0
526	Normal	0.0
445	Tumor	0.0
914	Normal	0.0
146	Normal	0.0
738	Normal	0.0
723	Tumor	0.0
391	Tumor	0.0
716	Normal	0.0
746	Normal	0.0
958	Normal	0.0
715	Tumor	0.0
472	Normal	0.0
535	Tumor	0.0
863	Tumor	0.0
744	Normal	0.0
483	Tumor	0.0
471	Tumor	0.0
364	Normal	0.0
563	Tumor	0.0
528	Normal	0.0
128	Normal	0.0
474	Normal	-0.1
527	Tumor	-0.1
567	Tumor	-0.1
514	Normal	-0.1
466	Normal	-0.1
722	Normal	-0.1
816	Normal	-0.1
976	Normal	-0.1
824	Normal	-0.1
356	Normal	-0.1
1016	Normal	-0.1
874	Normal	-0.1
1045	Tumor	-0.1
756	Normal	-0.1
728	Normal	-0.1
957	Tumor	-0.1
877	Tumor	-0.1
554	Normal	-0.1
525	Tumor	-0.1
883	Tumor	-0.1
778	Normal	-0.1
572	Normal	-0.1
813	Tumor	-0.1
516	Normal	-0.1
141	Tumor	-0.1
494	Normal	-0.1
967	Tumor	-0.1
497	Tumor	-0.1
534	Normal	-0.1
463	Tumor	-0.1
498	Normal	-0.1
865	Tumor	-0.2
978	Normal	-0.2
867	Tumor	-0.2
533	Tumor	-0.2
228	Normal	-0.2
984	Normal	-0.2
283	Tumor	-0.2
982	Normal	-0.2
671	Tumor	-0.2
884	Normal	-0.2
492	Normal	-0.2
925	Tumor	-0.2
478	Normal	-0.2
142	Normal	-0.2
882	Normal	-0.2
212	Normal	-0.2
685	Tumor	-0.2
416	Normal	-0.2
363	Tumor	-0.2
553	Tumor	-0.2
858	Normal	-0.2
491	Tumor	-0.2
488	Normal	-0.2
635	Tumor	-0.2
284	Normal	-0.2
923	Tumor	-0.2
473	Tumor	-0.3
221	Tumor	-0.3
975	Tumor	-0.3
328	Normal	-0.3
412	Normal	-0.3
558	Normal	-0.3
852	Normal	-0.3
878	Normal	-0.3
727	Tumor	-0.3
211	Tumor	-0.3
913	Tumor	-0.3
538	Normal	-0.3
517	Tumor	-0.3
224	Normal	-0.3
465	Tumor	-0.3
881	Tumor	-0.3
477	Tumor	-0.4
695	Tumor	-0.4
131	Tumor	-0.4
571	Tumor	-0.4
921	Tumor	-0.4
861	Tumor	-0.4
755	Tumor	-0.4
431	Tumor	-0.4
823	Tumor	-0.4
355	Tumor	-0.5
741	Tumor	-0.5
493	Tumor	-0.5
285	Tumor	-0.5
785	Tumor	-0.5
977	Tumor	-0.5
545	Tumor	-0.5
425	Tumor	-0.5
513	Tumor	-0.6
857	Tumor	-0.6
523	Tumor	-0.6
123	Tumor	-0.7
487	Tumor	-0.7
737	Tumor	-0.7
455	Tumor	-0.7
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA039437	Antibody HPA073929	Antibody CAB008364
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS