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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
100.9
nTPM
FANTOM5:
206.2
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
100.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 74.5
2301
Female, age 85, both hemispheres
81.1
2090
Male, age 80, both hemispheres
78.3
2188
Female, age 91, both hemispheres
71.0
1984
Male, age 76, both hemispheres
67.5
Dorsal cochlear nucleus nTPM: 76.3
2802
Male, age 74, right hemisphere
81.2
2187
Female, age 91, both hemispheres
79.9
2058
Male, age 76, both hemispheres
75.9
2370
Male, age 61, both hemispheres
72.7
2378
Male, age 80, both hemispheres
72.0
Dorsal tegmental nucleus nTPM: 88.0
2358
Male, age 61, both hemispheres
118.5
2083
Male, age 80, both hemispheres
82.8
2326
Male, age 74, both hemispheres
78.3
1936
Male, age 76, left hemisphere
72.5
Dorsolateral tegmental area nTPM: 74.9
2654
Male, age 80, both hemispheres
84.8
2337
Male, age 61, both hemispheres
84.7
2751
Female, age 85, both hemispheres
77.2
2141
Male, age 76, both hemispheres
65.2
2360
Male, age 74, both hemispheres
62.8
Kolliker-Fuse nucleus nTPM: 83.5
2163
Male, age 80, both hemispheres
91.6
2315
Male, age 76, right hemisphere
82.0
2793
Female, age 91, left hemisphere
76.7
Lateral lemniscal nuclei nTPM: 73.2
2453
Male, age 74, right hemisphere
80.2
2169
Male, age 76, both hemispheres
76.1
2746
Female, age 85, left hemisphere
74.9
2036
Male, age 80, both hemispheres
73.7
2320
Female, age 91, left hemisphere
61.0
Lateral parabrachial nucleus nTPM: 77.2
2792
Male, age 76, both hemispheres
80.1
2013
Male, age 80, both hemispheres
78.7
2790
Male, age 61, both hemispheres
75.6
2139
Female, age 85, right hemisphere
74.2
Lateral vestibular nucleus nTPM: 83.1
2184
Male, age 76, both hemispheres
86.2
2311
Male, age 80, both hemispheres
80.0
Locus coeruleus nTPM: 100.9
2123
Female, age 91, both hemispheres
121.1
2720
Male, age 74, both hemispheres
106.4
2014
Male, age 55, unknown
106.2
1980
Male, age 76, both hemispheres
105.0
2317
Female, age 72, unknown
97.4
2162
Male, age 80, both hemispheres
88.1
2788
Male, age 74, unknown
82.2
Medial parabrachial nucleus nTPM: 79.8
2170
Female, age 91, both hemispheres
88.3
2156
Male, age 61, both hemispheres
85.5
2463
Female, age 85, right hemisphere
77.5
2786
Male, age 76, both hemispheres
75.2
2854
Male, age 80, both hemispheres
72.5
Medial periolivary nuclei nTPM: 77.4
2063
Male, age 76, both hemispheres
86.0
2791
Male, age 74, right hemisphere
83.7
2171
Female, age 85, both hemispheres
82.6
2081
Male, age 80, both hemispheres
69.2
2458
Female, age 91, both hemispheres
65.3
Motor facial nucleus nTPM: 77.5
2062
Male, age 76, both hemispheres
87.2
2365
Male, age 74, right hemisphere
87.2
2795
Female, age 91, both hemispheres
75.6
2126
Male, age 61, both hemispheres
74.4
2697
Female, age 85, both hemispheres
71.6
2327
Male, age 80, both hemispheres
68.9
Motor trigeminal nucleus nTPM: 71.5
2335
Male, age 61, both hemispheres
80.2
2560
Male, age 74, both hemispheres
77.0
2309
Male, age 76, both hemispheres
72.4
2079
Male, age 80, both hemispheres
67.0
2321
Female, age 91, both hemispheres
60.9
Nuclei of the trapezoid body nTPM: 76.0
2159
Male, age 61, both hemispheres
87.1
1983
Male, age 76, both hemispheres
82.9
2735
Female, age 85, both hemispheres
78.2
2166
Male, age 80, both hemispheres
69.4
2368
Female, age 91, both hemispheres
62.6
Nucleus raphe magnus nTPM: 77.1
2160
Male, age 61, both hemispheres
91.4
2172
Female, age 85, both hemispheres
84.5
2455
Male, age 74, both hemispheres
76.6
2051
Male, age 76, both hemispheres
76.1
2328
Male, age 80, both hemispheres
70.9
2459
Female, age 91, both hemispheres
62.9
Paramedian reticular nucleus nTPM: 80.6
2050
Female, age 85, both hemispheres
89.7
2313
Male, age 61, both hemispheres
86.9
2057
Male, age 80, both hemispheres
83.3
2052
Male, age 76, both hemispheres
62.5
Pedunculopontine tegmental nucleus nTPM: 85.9
2334
Male, age 80, both hemispheres
93.5
2338
Male, age 61, both hemispheres
90.6
1921
Female, age 85, both hemispheres
73.6
Pontine nuclei nTPM: 83.0
1863
Male, age 55, unknown
97.5
2787
Female, age 85, both hemispheres
97.0
2727
Male, age 61, right hemisphere
87.2
2109
Female, age 72, unknown
84.8
1968
Male, age 76, left hemisphere
82.0
2454
Male, age 74, left hemisphere
77.0
2319
Female, age 91, both hemispheres
69.6
2115
Male, age 80, left hemisphere
68.7
Pontine raphe nucleus nTPM: 78.8
2853
Male, age 76, midline
80.9
2122
Female, age 85, midline
76.6
Posteroventral cochlear nucleus nTPM: 76.7
2070
Male, age 76, both hemispheres
81.9
2752
Female, age 85, both hemispheres
77.5
2341
Male, age 80, both hemispheres
76.4
2371
Male, age 61, both hemispheres
74.7
2135
Female, age 91, both hemispheres
73.2
Principal sensory trigeminal nucleus nTPM: 75.4
2158
Male, age 61, both hemispheres
88.8
2324
Male, age 76, both hemispheres
81.8
2008
Male, age 80, left hemisphere
65.9
2367
Female, age 91, left hemisphere
65.2
Reticular pontine nucleus, caudal nTPM: 71.5
2092
Male, age 76, both hemispheres
77.4
2332
Male, age 80, right hemisphere
72.8
2559
Male, age 74, both hemispheres
68.7
2457
Female, age 91, both hemispheres
67.1
Reticular pontine nucleus, oral nTPM: 76.7
1939
Male, age 80, both hemispheres
86.4
2361
Male, age 74, both hemispheres
81.4
2167
Male, age 76, both hemispheres
74.7
2012
Female, age 85, both hemispheres
71.5
2366
Female, age 91, both hemispheres
69.2
Reticulotegmental nucleus nTPM: 78.1
2333
Male, age 80, both hemispheres
81.0
2325
Male, age 76, both hemispheres
79.4
2452
Male, age 74, both hemispheres
77.1
2322
Female, age 91, both hemispheres
74.7
Spinal trigeminal nucleus, oral nTPM: 82.1
2164
Male, age 80, both hemispheres
89.5
2737
Female, age 85, both hemispheres
84.9
1978
Male, age 76, both hemispheres
71.9
Subcoeruleus area nTPM: 77.0
2323
Female, age 91, left hemisphere
89.7
1958
Male, age 80, both hemispheres
77.7
2369
Female, age 85, left hemisphere
75.9
2451
Male, age 74, both hemispheres
73.1
2089
Male, age 76, left hemisphere
68.3
Superior olive nTPM: 74.3
2020
Male, age 76, both hemispheres
79.6
1875
Female, age 85, both hemispheres
79.4
2364
Male, age 74, right hemisphere
78.1
2561
Female, age 91, both hemispheres
68.4
2329
Male, age 80, right hemisphere
66.1
Ventral periolivary nuclei nTPM: 73.8
2130
Female, age 85, both hemispheres
77.3
2165
Male, age 80, both hemispheres
76.2
2023
Male, age 76, both hemispheres
75.7
2794
Female, age 91, left hemisphere
66.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 75.0
2359
Male, age 61, both hemispheres
82.8
2449
Male, age 74, both hemispheres
78.9
2840
Female, age 85, both hemispheres
76.3
1959
Male, age 76, both hemispheres
75.3
2161
Male, age 80, both hemispheres
71.5
2456
Female, age 91, both hemispheres
65.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.