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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
114.2
nTPM
HPA Brain:
31.5
nTPM
GTEx:
114.2
nTPM
FANTOM5:
69.4
Scaled Tags Per Million
Pig:
41.9
nTPM
Mouse:
18.8
nTPM
Allen mouse:
1.0
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
31.5
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 22.2
1870
Female, age 42, unknown
29.2
2411
Female, age 72, unknown
27.8
1827
Male, age 72, unknown
26.0
2019
Male, age 18, unknown
26.0
1830
Male, age 51, unknown
21.6
2828
Female, age 72, unknown
21.3
1833
Male, age 53, unknown
21.1
2219
Male, age 76, both hemispheres
19.5
2586
Male, age 75, left hemisphere
15.7
2666
Male, age 74, left hemisphere
14.3
Dorsal raphe nucleus nTPM: 29.2
2298
Female, age 72, unknown
41.1
2047
Male, age 72, unknown
28.1
1828
Male, age 53, unknown
27.3
2750
Male, age 76, both hemispheres
25.4
2016
Female, age 72, unknown
24.0
Inferior colliculus nTPM: 24.6
2097
Female, age 72, unknown
34.8
1890
Male, age 53, unknown
25.7
1848
Female, age 42, unknown
19.6
2849
Male, age 72, unknown
18.3
Median raphe nucleus nTPM: 31.5
2220
Male, age 76, midline
31.5
Periaquaductal grey, anterior nTPM: 24.5
1947
Male, age 18, unknown
25.0
1795
Male, age 51, unknown
24.5
2502
Female, age 75, unknown
23.8
Periaquaductal grey, dorsal nTPM: 24.6
2850
Male, age 76, both hemispheres
27.8
1831
Male, age 72, unknown
25.1
2464
Female, age 72, unknown
23.4
1840
Male, age 53, unknown
22.2
Periaquaductal grey, lateral nTPM: 22.5
2053
Male, age 18, unknown
23.1
2272
Male, age 74, both hemispheres
22.9
2140
Male, age 76, both hemispheres
21.4
Pretectal area nTPM: 29.2
2224
Female, age 72, unknown
35.6
1817
Female, age 42, unknown
33.7
2007
Male, age 72, unknown
33.7
2667
Female, age 75, unknown
32.6
1816
Male, age 51, unknown
30.0
2273
Male, age 74, both hemispheres
28.8
1815
Male, age 53, unknown
28.2
1944
Female, age 72, unknown
28.2
2316
Male, age 76, right hemisphere
24.7
2825
Male, age 18, unknown
23.8
2407
Male, age 75, both hemispheres
21.8
Red nucleus nTPM: 24.3
1821
Female, age 72, unknown
31.9
1954
Female, age 42, unknown
30.8
1865
Male, age 51, unknown
28.9
2823
Male, age 76, right hemisphere
27.2
1904
Male, age 53, unknown
26.8
2503
Female, age 72, unknown
26.5
2785
Male, age 18, unknown
25.3
2725
Female, age 75, unknown
23.7
2769
Male, age 72, unknown
21.7
2227
Male, age 72, unknown
19.2
2584
Male, age 75, left hemisphere
17.2
2588
Male, age 74, left hemisphere
13.1
Substantia nigra nTPM: 27.0
1916
Female, age 42, unknown
34.5
2241
Male, age 72, unknown
32.1
2665
Male, age 74, both hemispheres
31.1
1889
Female, age 72, unknown
30.3
1851
Male, age 51, unknown
28.6
1941
Male, age 53, unknown
26.3
2699
Male, age 18, unknown
26.3
2590
Female, age 75, unknown
23.7
2409
Female, age 72, unknown
20.5
2583
Male, age 75, right hemisphere
16.1
Superior colliculus nTPM: 23.3
1895
Male, age 76, right hemisphere
26.6
1913
Female, age 42, unknown
25.6
1796
Male, age 53, unknown
25.3
2587
Male, age 74, left hemisphere
24.9
1995
Male, age 72, unknown
23.8
2668
Female, age 75, unknown
23.4
2087
Female, age 72, unknown
23.0
2261
Male, age 18, unknown
21.1
1839
Male, age 51, unknown
19.8
2664
Male, age 75, both hemispheres
19.6
Ventral tegmental area nTPM: 25.6
1915
Female, age 42, unknown
32.1
2410
Female, age 72, unknown
26.3
2218
Male, age 76, both hemispheres
26.1
2021
Male, age 53, unknown
23.6
2223
Female, age 72, unknown
23.5
1942
Male, age 51, unknown
21.7
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
114.2
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 114.2
Samples: 139
Max nTPM: 212.3
Min nTPM: 68.8
Std nTPM: 27.0
Median nTPM: 108.2
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
212.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
201.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
200.1
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
197.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
187.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
182.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
179.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
174.6
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
168.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
159.2
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
157.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
156.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
148.1
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
147.9
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
147.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
144.6
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
144.4
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
143.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
142.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
138.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
137.8
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
137.1
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
133.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
132.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
131.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
131.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
130.6
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
128.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
126.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
126.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
124.9
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
124.4
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
123.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
123.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
122.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
122.3
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
121.8
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
121.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
121.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
121.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
121.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
121.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
120.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
120.3
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
120.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
120.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
119.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
119.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
119.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
118.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
118.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
117.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
116.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
115.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
115.5
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
115.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
114.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
114.3
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
113.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
111.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
110.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
109.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
109.8
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
109.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
109.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
109.4
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
109.2
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
108.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
108.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
108.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
108.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
107.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
106.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
106.4
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
105.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
105.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
105.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
105.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
105.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
105.1
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
104.6
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
104.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
104.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
104.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
103.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
103.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
102.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
101.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
101.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
101.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
101.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
100.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
100.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
100.6
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
100.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
100.1
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
100.1
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
99.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
98.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
98.4
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
98.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
97.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
97.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
96.6
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
96.3
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
95.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
94.9
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
94.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
94.6
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
94.2
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
94.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
94.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
93.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
93.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
92.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
92.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
92.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
91.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
90.7
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
90.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
90.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
88.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
87.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
87.1
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
87.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
86.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
86.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
85.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
85.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
83.3
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
83.2
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
81.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
81.0
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
79.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
79.4
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
78.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
78.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
71.2
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
68.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
18.8
Mouse sample
Sample description
nTPM
Midbrain nTPM: 18.8
Samples: 4
Max nTPM: 22.7
Min nTPM: 15.7
Sample A
Male
19.6
Sample B
Male
22.7
Sample C
Female
15.7
Sample D
Female
17.2
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.