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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
122.2
nTPM
HPA Brain:
34.4
nTPM
GTEx:
122.2
nTPM
FANTOM5:
54.9
Scaled Tags Per Million
Pig:
30.3
nTPM
Mouse:
20.7
nTPM
Allen mouse:
1.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
34.4
Sample id
Sample description
nTPM
Amygdala nTPM: 34.4
2695
Female, age 67, right hemisphere
56.5
2514
Male, age 75, right hemisphere
33.8
2814
Male, age 76, right hemisphere
30.3
1987
Female, age 91, left hemisphere
25.9
2517
Female, age 94, left hemisphere
25.7
Basal amygdala nTPM: 22.0
2609
Male, age 75, right hemisphere
25.2
2110
Male, age 80, left hemisphere
24.8
2685
Female, age 94, left hemisphere
23.6
1955
Male, age 76, both hemispheres
23.3
2243
Female, age 91, right hemisphere
19.5
2827
Female, age 67, right hemisphere
15.9
Central amygdala nTPM: 27.7
2826
Female, age 94, left hemisphere
33.0
1905
Male, age 76, both hemispheres
30.5
2515
Male, age 75, right hemisphere
29.9
2239
Male, age 80, left hemisphere
22.5
2701
Female, age 91, right hemisphere
22.5
Corticomedial amygdala nTPM: 23.1
2829
Male, age 80, left hemisphere
28.5
2428
Male, age 75, right hemisphere
27.9
2429
Female, age 94, left hemisphere
25.4
2240
Male, age 76, both hemispheres
23.3
2242
Female, age 91, right hemisphere
21.5
2535
Female, age 67, right hemisphere
11.8
Lateral amygdala nTPM: 22.3
1883
Male, age 76, both hemispheres
29.5
2516
Male, age 75, right hemisphere
29.1
2534
Female, age 94, left hemisphere
24.0
2256
Male, age 80, left hemisphere
18.8
2830
Female, age 67, right hemisphere
18.4
2255
Female, age 91, right hemisphere
14.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
122.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 122.2
Samples: 152
Max nTPM: 390.2
Min nTPM: 54.7
Std nTPM: 48.5
Median nTPM: 111.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
390.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
373.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
287.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
279.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
248.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
233.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
206.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
206.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
192.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
188.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
185.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
179.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
177.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
176.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
175.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
173.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
173.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
170.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
165.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
163.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
160.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
156.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
155.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
153.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
150.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
149.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
147.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
147.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
143.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
140.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
140.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
139.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
139.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
138.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
136.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
136.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
136.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
135.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
134.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
134.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
133.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
131.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
130.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
129.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
129.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
129.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
127.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
127.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
126.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
125.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
125.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
124.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
124.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
123.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
123.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
122.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
122.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
122.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
120.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
120.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
119.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
118.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
116.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
116.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
115.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
115.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
113.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
113.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
113.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
113.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
113.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
113.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
112.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
112.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
111.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
111.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
111.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
111.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
110.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
110.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
109.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
109.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
108.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
107.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
107.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
106.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
106.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
104.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
103.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
103.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
103.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
102.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
102.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
101.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
100.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
100.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
100.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
99.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
99.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
98.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
98.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
97.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
97.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
97.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
97.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
97.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
95.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
95.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
95.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
95.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
95.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
94.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
94.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
94.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
93.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
93.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
93.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
93.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
92.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
92.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
91.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
91.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
91.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
91.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
91.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
91.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
89.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
87.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
87.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
86.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
85.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
84.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
84.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
83.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
83.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
81.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
81.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
81.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
78.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
78.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
78.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
78.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
77.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
77.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
75.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
74.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
72.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
69.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
68.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
62.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
62.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
54.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
20.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 20.8
Samples: 4
Max nTPM: 24.3
Min nTPM: 17.2
Sample A
Male
18.5
Sample B
Male
23.0
Sample C
Female
24.3
Sample D
Female
17.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.