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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
117.9
nTPM
GTEx:
117.9
nTPM
FANTOM5:
68.8
Scaled Tags Per Million
Pig:
109.4
nTPM
Mouse:
74.8
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
117.9
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 117.9
Samples: 105
Max nTPM: 203.7
Min nTPM: 68.3
Std nTPM: 28.0
Median nTPM:
490_1
67 years, female
203.7
149_1
88 years, male
177.1
32_1
67 years, male
176.1
119_1
70 years, female
173.2
491_1
89 years, female
169.2
162_1
79 years, female
168.4
142_1
61 years, female
168.1
413_1
59 years, female
167.6
415_1
77 years, female
165.1
117_1
61 years, male
164.7
89_1
63 years, male
164.2
42_1
85 years, male
158.3
81_1
67 years, male
157.6
43_1
64 years, female
153.1
414_1
84 years, female
152.9
99_1
64 years, male
151.7
120_1
70 years, female
149.3
347_1
72 years, male
146.7
109_1
81 years, female
146.1
466_1
57 years, female
144.5
9_1
66 years, female
140.3
137_1
83 years, male
139.8
18_1
88 years, male
138.5
315_1
62 years, female
136.8
526_1
61 years, male
136.7
145_1
84 years, male
135.9
501_1
88 years, male
132.7
324_1
76 years, male
131.5
35_1
74 years, female
131.4
115_1
83 years, male
130.3
139_1
64 years, female
129.9
6_1
73 years, female
129.5
317_1
60 years, male
129.4
229_1
69 years, female
129.3
126_1
63 years, male
128.2
173_1
67 years, male
127.7
404_1
82 years, female
127.3
468_1
89 years, male
125.1
17_1
71 years, male
123.9
425_1
59 years, female
122.8
254_1
77 years, female
119.3
314_1
67 years, male
118.6
499_1
55 years, female
118.3
217_1
76 years, male
118.2
177_1
74 years, male
117.7
313_1
79 years, female
115.5
311_1
78 years, male
114.6
518_1
75 years, female
114.5
266_1
85 years, male
114.3
153_1
70 years, female
113.7
4_1
88 years, female
113.6
495_1
57 years, female
113.0
506_1
65 years, male
112.5
265_1
87 years, male
112.2
288_1
66 years, female
112.1
350_1
84 years, female
112.0
355_1
70 years, female
112.0
2_1
77 years, female
111.8
172_1
72 years, female
111.6
480_1
63 years, male
111.1
406_1
79 years, male
109.7
295_1
61 years, female
108.8
292_1
71 years, male
107.8
405_1
91 years, male
107.6
307_1
66 years, female
107.4
396_1
62 years, male
107.0
386_1
76 years, male
105.5
237_1
82 years, male
105.1
503_1
68 years, male
105.0
348_1
84 years, male
104.7
41_1
94 years, female
104.1
251_1
78 years, male
103.7
353_1
82 years, female
103.2
291_1
76 years, male
103.1
335_1
73 years, female
103.1
352_1
62 years, male
102.9
375_1
74 years, female
100.9
452_1
88 years, female
100.6
389_1
86 years, female
100.0
447_1
81 years, male
99.6
517_1
88 years, male
99.3
351_1
91 years, male
99.2
264_1
73 years, female
98.2
243_1
75 years, male
97.9
349_1
83 years, male
96.7
246_1
77 years, male
96.1
321_1
62 years, female
94.9
318_1
68 years, male
93.6
163_1
78 years, male
90.1
286_1
68 years, female
90.1
189_1
76 years, male
88.0
379_1
60 years, male
84.0
354_1
81 years, female
83.8
394_1
75 years, female
80.8
293_1
68 years, female
80.5
319_1
81 years, male
80.5
356_1
87 years, female
79.8
320_1
89 years, female
77.4
376_1
75 years, female
77.4
377_1
82 years, female
76.0
308_1
70 years, female
75.4
316_1
62 years, male
70.6
384_1
83 years, male
70.4
322_1
76 years, male
68.7
218_1
71 years, female
68.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.