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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
210.7
nTPM
HPA Brain:
224.8
nTPM
GTEx:
210.7
nTPM
FANTOM5:
84.9
Scaled Tags Per Million
Pig:
84.1
nTPM
Mouse:
19.9
nTPM
Allen mouse:
6.6
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
224.8
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 143.6
2828
Female, age 72, unknown
265.2
2586
Male, age 75, left hemisphere
259.3
1827
Male, age 72, unknown
162.4
2666
Male, age 74, left hemisphere
137.2
1833
Male, age 53, unknown
129.1
1870
Female, age 42, unknown
114.3
1830
Male, age 51, unknown
107.3
2019
Male, age 18, unknown
97.2
2219
Male, age 76, both hemispheres
84.6
2411
Female, age 72, unknown
79.0
Dorsal raphe nucleus nTPM: 109.5
2016
Female, age 72, unknown
151.1
1828
Male, age 53, unknown
139.5
2298
Female, age 72, unknown
94.2
2047
Male, age 72, unknown
83.9
2750
Male, age 76, both hemispheres
79.0
Inferior colliculus nTPM: 167.1
2849
Male, age 72, unknown
211.0
1848
Female, age 42, unknown
190.7
1890
Male, age 53, unknown
151.1
2097
Female, age 72, unknown
115.7
Median raphe nucleus nTPM: 76.3
2220
Male, age 76, midline
76.3
Periaquaductal grey, anterior nTPM: 172.7
1795
Male, age 51, unknown
201.1
2502
Female, age 75, unknown
188.5
1947
Male, age 18, unknown
128.4
Periaquaductal grey, dorsal nTPM: 224.8
2850
Male, age 76, both hemispheres
263.3
1831
Male, age 72, unknown
259.8
1840
Male, age 53, unknown
238.1
2464
Female, age 72, unknown
137.9
Periaquaductal grey, lateral nTPM: 196.5
2053
Male, age 18, unknown
229.4
2140
Male, age 76, both hemispheres
227.6
2272
Male, age 74, both hemispheres
132.3
Pretectal area nTPM: 204.6
2667
Female, age 75, unknown
268.0
2273
Male, age 74, both hemispheres
263.7
1816
Male, age 51, unknown
237.9
1944
Female, age 72, unknown
219.2
2407
Male, age 75, both hemispheres
219.1
2316
Male, age 76, right hemisphere
215.0
1815
Male, age 53, unknown
214.7
1817
Female, age 42, unknown
200.6
2825
Male, age 18, unknown
168.0
2007
Male, age 72, unknown
127.4
2224
Female, age 72, unknown
117.6
Red nucleus nTPM: 129.7
2503
Female, age 72, unknown
160.4
2588
Male, age 74, left hemisphere
146.5
2823
Male, age 76, right hemisphere
139.8
2769
Male, age 72, unknown
137.9
2227
Male, age 72, unknown
135.3
2725
Female, age 75, unknown
127.2
2584
Male, age 75, left hemisphere
124.2
1821
Female, age 72, unknown
123.6
1904
Male, age 53, unknown
122.4
1954
Female, age 42, unknown
115.7
1865
Male, age 51, unknown
113.1
2785
Male, age 18, unknown
109.9
Substantia nigra nTPM: 158.0
2699
Male, age 18, unknown
306.3
1889
Female, age 72, unknown
180.9
1851
Male, age 51, unknown
174.6
1916
Female, age 42, unknown
169.0
2583
Male, age 75, right hemisphere
149.5
2409
Female, age 72, unknown
134.8
2665
Male, age 74, both hemispheres
134.5
2241
Male, age 72, unknown
118.5
2590
Female, age 75, unknown
117.8
1941
Male, age 53, unknown
94.2
Superior colliculus nTPM: 221.4
2664
Male, age 75, both hemispheres
396.3
1995
Male, age 72, unknown
248.1
1796
Male, age 53, unknown
243.9
2087
Female, age 72, unknown
226.6
2261
Male, age 18, unknown
215.2
1839
Male, age 51, unknown
203.9
2668
Female, age 75, unknown
183.4
2587
Male, age 74, left hemisphere
178.8
1913
Female, age 42, unknown
174.7
1895
Male, age 76, right hemisphere
143.1
Ventral tegmental area nTPM: 116.5
1915
Female, age 42, unknown
143.6
2021
Male, age 53, unknown
119.8
2223
Female, age 72, unknown
115.1
2410
Female, age 72, unknown
110.3
2218
Male, age 76, both hemispheres
107.4
1942
Male, age 51, unknown
102.5
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
210.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 210.7
Samples: 139
Max nTPM: 1690.4
Min nTPM: 26.8
Std nTPM: 168.7
Median nTPM: 183.7
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
1690.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
606.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
535.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
530.7
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
485.5
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
453.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
447.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
426.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
422.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
419.3
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
410.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
408.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
379.9
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
370.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
354.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
353.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
349.1
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
348.1
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
342.2
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
332.7
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
317.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
298.3
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
293.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
291.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
279.8
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
278.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
277.3
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
276.4
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
276.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
269.4
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
266.5
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
259.2
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
257.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
255.4
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
252.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
250.5
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
248.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
248.5
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
248.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
246.8
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
243.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
242.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
240.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
236.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
235.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
232.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
232.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
225.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
224.3
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
219.2
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
217.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
216.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
216.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
215.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
209.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
208.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
208.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
201.1
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
200.3
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
199.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
194.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
192.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
192.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
191.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
191.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
186.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
184.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
184.0
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
183.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
183.7
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
179.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
179.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
179.4
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
178.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
174.9
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
174.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
174.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
173.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
171.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
171.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
158.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
155.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
155.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
154.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
146.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
145.8
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
145.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
145.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
143.9
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
139.5
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
138.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
137.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
136.4
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
131.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
130.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
129.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
128.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
126.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
126.7
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
124.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
123.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
123.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
122.3
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
116.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
113.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
112.8
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
111.3
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
111.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
110.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
108.6
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
107.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
105.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
103.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
102.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
98.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
96.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
95.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
94.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
86.3
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
85.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
83.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
80.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
78.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
78.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
77.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
77.7
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
77.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
74.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
74.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
69.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
69.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
65.8
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
64.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
57.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
55.1
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
44.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
39.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
34.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
26.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
19.9
Mouse sample
Sample description
nTPM
Midbrain nTPM: 19.9
Samples: 4
Max nTPM: 23.5
Min nTPM: 16.8
Sample A
Male
18.8
Sample B
Male
20.5
Sample C
Female
16.8
Sample D
Female
23.5
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.