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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
76.9
nTPM
HPA Brain:
32.5
nTPM
GTEx:
76.9
nTPM
FANTOM5:
21.6
Scaled Tags Per Million
Pig:
15.3
nTPM
Mouse:
80.3
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
32.5
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 19.4
1870
Female, age 42, unknown
22.5
2219
Male, age 76, both hemispheres
22.4
2586
Male, age 75, left hemisphere
20.5
2828
Female, age 72, unknown
20.4
2411
Female, age 72, unknown
19.2
1827
Male, age 72, unknown
18.8
1830
Male, age 51, unknown
18.2
1833
Male, age 53, unknown
17.5
2019
Male, age 18, unknown
17.4
2666
Male, age 74, left hemisphere
17.2
Dorsal raphe nucleus nTPM: 24.6
2298
Female, age 72, unknown
30.0
2750
Male, age 76, both hemispheres
28.1
2047
Male, age 72, unknown
27.1
1828
Male, age 53, unknown
21.5
2016
Female, age 72, unknown
16.2
Inferior colliculus nTPM: 18.9
2097
Female, age 72, unknown
21.0
1890
Male, age 53, unknown
19.4
2849
Male, age 72, unknown
19.0
1848
Female, age 42, unknown
16.3
Median raphe nucleus nTPM: 32.5
2220
Male, age 76, midline
32.5
Periaquaductal grey, anterior nTPM: 22.5
1947
Male, age 18, unknown
23.7
2502
Female, age 75, unknown
22.1
1795
Male, age 51, unknown
21.6
Periaquaductal grey, dorsal nTPM: 17.7
2850
Male, age 76, both hemispheres
22.7
1840
Male, age 53, unknown
19.2
1831
Male, age 72, unknown
17.0
2464
Female, age 72, unknown
11.9
Periaquaductal grey, lateral nTPM: 19.8
2140
Male, age 76, both hemispheres
21.2
2272
Male, age 74, both hemispheres
21.0
2053
Male, age 18, unknown
17.4
Pretectal area nTPM: 21.4
2224
Female, age 72, unknown
26.6
1817
Female, age 42, unknown
26.3
2273
Male, age 74, both hemispheres
24.2
2667
Female, age 75, unknown
24.0
1816
Male, age 51, unknown
23.9
2007
Male, age 72, unknown
23.2
1944
Female, age 72, unknown
22.8
2825
Male, age 18, unknown
19.6
1815
Male, age 53, unknown
18.4
2316
Male, age 76, right hemisphere
13.1
2407
Male, age 75, both hemispheres
13.1
Red nucleus nTPM: 22.0
1821
Female, age 72, unknown
29.1
1865
Male, age 51, unknown
26.6
2503
Female, age 72, unknown
25.6
2785
Male, age 18, unknown
25.0
1954
Female, age 42, unknown
24.3
1904
Male, age 53, unknown
23.7
2227
Male, age 72, unknown
22.3
2769
Male, age 72, unknown
21.2
2823
Male, age 76, right hemisphere
20.6
2725
Female, age 75, unknown
20.2
2584
Male, age 75, left hemisphere
15.9
2588
Male, age 74, left hemisphere
9.2
Substantia nigra nTPM: 23.3
1916
Female, age 42, unknown
39.0
1851
Male, age 51, unknown
24.9
2699
Male, age 18, unknown
24.7
1941
Male, age 53, unknown
23.3
2665
Male, age 74, both hemispheres
23.3
1889
Female, age 72, unknown
22.9
2409
Female, age 72, unknown
22.2
2590
Female, age 75, unknown
19.3
2241
Male, age 72, unknown
18.9
2583
Male, age 75, right hemisphere
14.8
Superior colliculus nTPM: 17.8
2587
Male, age 74, left hemisphere
23.5
1796
Male, age 53, unknown
23.1
1913
Female, age 42, unknown
19.4
2668
Female, age 75, unknown
19.0
2087
Female, age 72, unknown
18.4
2261
Male, age 18, unknown
17.2
1895
Male, age 76, right hemisphere
16.6
1995
Male, age 72, unknown
16.4
1839
Male, age 51, unknown
14.3
2664
Male, age 75, both hemispheres
10.3
Ventral tegmental area nTPM: 25.2
2218
Male, age 76, both hemispheres
32.1
1915
Female, age 42, unknown
29.3
2223
Female, age 72, unknown
26.2
2410
Female, age 72, unknown
22.7
1942
Male, age 51, unknown
21.1
2021
Male, age 53, unknown
19.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
76.9
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 76.9
Samples: 139
Max nTPM: 156.8
Min nTPM: 32.0
Std nTPM: 19.4
Median nTPM: 74.2
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
156.8
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
129.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
129.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
123.8
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
121.9
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
121.8
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
117.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
114.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
113.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
111.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
107.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
105.7
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
104.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
102.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
102.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
101.8
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
100.7
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
99.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
95.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
94.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
93.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
93.1
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
92.7
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
92.4
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
92.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
92.1
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
90.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
88.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
88.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
88.3
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
87.4
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
87.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
87.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
87.1
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
86.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
86.1
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
85.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
83.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
83.6
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
82.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
82.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
82.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
82.1
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
81.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
80.8
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
80.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
80.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
80.1
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
80.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
79.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
79.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
78.8
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
78.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
78.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
78.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
78.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
78.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
77.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
77.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
77.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
76.9
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
76.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
76.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
76.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
76.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
75.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
75.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
75.1
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
75.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
74.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
74.1
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
73.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
73.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
73.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
73.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
72.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
72.5
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
72.4
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
72.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
72.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
71.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
71.3
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
70.8
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
70.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
69.2
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
68.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
68.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
68.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
68.6
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
68.2
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
68.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
68.1
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
67.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
67.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
67.6
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
67.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
66.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
66.9
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
66.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
66.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
65.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
65.3
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
64.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
64.4
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
63.3
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
63.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
63.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
62.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
62.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
62.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
62.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
61.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
61.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
61.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
60.5
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
60.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
60.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
60.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
59.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
58.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
58.0
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
57.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
57.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
57.1
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
56.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
56.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
56.4
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
56.3
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
54.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
54.0
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
52.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
50.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
50.2
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
49.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
48.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
47.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
40.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
38.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
32.0
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.