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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
13.7
nTPM
HPA Brain:
102.8
nTPM
GTEx:
13.7
nTPM
FANTOM5:
33.5
Scaled Tags Per Million
Pig:
25.9
nTPM
Mouse:
43.8
nTPM
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
102.8
Sample id
Sample description
nTPM
Amygdala nTPM: 67.5
2517
Female, age 94, left hemisphere
93.5
2514
Male, age 75, right hemisphere
79.8
1987
Female, age 91, left hemisphere
68.5
2695
Female, age 67, right hemisphere
51.4
2814
Male, age 76, right hemisphere
44.2
Basal amygdala nTPM: 102.8
2243
Female, age 91, right hemisphere
139.2
2609
Male, age 75, right hemisphere
107.3
2827
Female, age 67, right hemisphere
105.5
2110
Male, age 80, left hemisphere
97.2
2685
Female, age 94, left hemisphere
96.3
1955
Male, age 76, both hemispheres
71.2
Central amygdala nTPM: 74.2
2826
Female, age 94, left hemisphere
96.8
2239
Male, age 80, left hemisphere
95.4
2515
Male, age 75, right hemisphere
77.0
2701
Female, age 91, right hemisphere
54.3
1905
Male, age 76, both hemispheres
47.7
Corticomedial amygdala nTPM: 100.2
2535
Female, age 67, right hemisphere
125.9
2829
Male, age 80, left hemisphere
116.8
2242
Female, age 91, right hemisphere
113.5
2428
Male, age 75, right hemisphere
95.3
2429
Female, age 94, left hemisphere
87.1
2240
Male, age 76, both hemispheres
62.7
Lateral amygdala nTPM: 85.7
2256
Male, age 80, left hemisphere
120.6
2534
Female, age 94, left hemisphere
111.8
2255
Female, age 91, right hemisphere
77.5
2516
Male, age 75, right hemisphere
76.7
2830
Female, age 67, right hemisphere
73.8
1883
Male, age 76, both hemispheres
53.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
13.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 13.7
Samples: 152
Max nTPM: 28.5
Min nTPM: 2.2
Std nTPM: 4.7
Median nTPM: 13.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
28.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
24.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
23.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
23.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
23.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
22.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
21.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
21.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
21.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
20.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
20.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
20.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
20.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
20.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
20.3
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
20.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
20.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
19.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
19.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
19.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
19.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
19.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
18.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
18.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
18.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
18.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
18.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
18.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
18.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
18.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
18.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
18.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
18.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
17.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
17.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
17.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
17.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
17.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
17.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
16.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
16.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
16.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
16.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
16.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
16.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
16.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
16.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
15.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
15.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
15.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
15.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
15.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
15.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
14.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
14.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
14.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
14.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
14.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
14.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
14.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
14.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
14.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
14.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
14.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
14.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
14.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
14.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
14.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
14.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
14.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
13.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
13.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
13.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
13.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
13.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
13.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
13.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
13.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
13.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
13.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
12.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
12.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
12.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
12.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
12.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
12.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
12.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
12.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
12.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
12.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
12.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
11.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
11.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
11.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
11.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
11.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
11.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
11.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
11.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
11.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
11.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
11.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
11.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
11.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
11.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
11.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
10.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
10.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
10.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
10.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
10.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
10.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
10.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
10.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
10.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
10.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
10.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
9.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
9.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
9.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
9.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
9.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
9.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
9.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
9.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
9.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
9.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
9.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
9.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
8.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
8.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
8.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
8.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
8.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
8.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
8.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
8.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
8.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
8.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
7.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
7.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
7.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
7.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
6.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
6.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
6.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
5.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
5.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
3.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
3.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
3.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
2.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.