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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
482.1
nTPM
GTEx:
482.1
nTPM
FANTOM5:
270.2
Scaled Tags Per Million
Pig:
90.6
nTPM
Mouse:
217.2
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
482.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 482.1
Samples: 105
Max nTPM: 754.0
Min nTPM: 285.6
Std nTPM: 99.7
Median nTPM:
237_1
82 years, male
754.0
495_1
57 years, female
740.1
394_1
75 years, female
684.4
389_1
86 years, female
674.8
375_1
74 years, female
655.0
503_1
68 years, male
648.3
384_1
83 years, male
646.2
499_1
55 years, female
636.9
42_1
85 years, male
627.6
466_1
57 years, female
619.1
126_1
63 years, male
613.7
313_1
79 years, female
609.9
335_1
73 years, female
609.3
218_1
71 years, female
604.2
163_1
78 years, male
601.3
308_1
70 years, female
599.1
266_1
85 years, male
595.2
246_1
77 years, male
594.2
189_1
76 years, male
573.7
377_1
82 years, female
567.0
518_1
75 years, female
565.0
229_1
69 years, female
562.8
414_1
84 years, female
561.4
321_1
62 years, female
560.3
406_1
79 years, male
559.9
526_1
61 years, male
559.4
347_1
72 years, male
558.7
355_1
70 years, female
552.9
517_1
88 years, male
552.2
293_1
68 years, female
551.5
376_1
75 years, female
549.4
468_1
89 years, male
548.9
396_1
62 years, male
538.5
251_1
78 years, male
536.0
307_1
66 years, female
533.0
35_1
74 years, female
532.1
265_1
87 years, male
530.0
379_1
60 years, male
529.0
404_1
82 years, female
528.8
217_1
76 years, male
519.9
386_1
76 years, male
517.5
425_1
59 years, female
515.8
117_1
61 years, male
507.4
405_1
91 years, male
498.9
292_1
71 years, male
489.0
137_1
83 years, male
480.3
18_1
88 years, male
476.1
317_1
60 years, male
473.7
177_1
74 years, male
473.0
162_1
79 years, female
468.9
4_1
88 years, female
467.9
153_1
70 years, female
464.5
356_1
87 years, female
462.4
447_1
81 years, male
461.9
286_1
68 years, female
459.4
6_1
73 years, female
458.1
413_1
59 years, female
455.7
2_1
77 years, female
454.0
17_1
71 years, male
451.9
9_1
66 years, female
451.5
480_1
63 years, male
449.6
319_1
81 years, male
442.6
243_1
75 years, male
441.5
41_1
94 years, female
438.4
120_1
70 years, female
430.8
173_1
67 years, male
429.1
254_1
77 years, female
427.1
291_1
76 years, male
422.8
350_1
84 years, female
422.6
315_1
62 years, female
422.4
145_1
84 years, male
421.2
324_1
76 years, male
420.4
415_1
77 years, female
418.4
352_1
62 years, male
416.8
99_1
64 years, male
414.4
149_1
88 years, male
413.7
288_1
66 years, female
412.4
142_1
61 years, female
410.9
316_1
62 years, male
409.6
115_1
83 years, male
408.5
349_1
83 years, male
405.2
81_1
67 years, male
396.6
264_1
73 years, female
396.1
318_1
68 years, male
394.5
354_1
81 years, female
393.6
322_1
76 years, male
392.2
172_1
72 years, female
390.4
295_1
61 years, female
389.1
348_1
84 years, male
385.3
501_1
88 years, male
380.1
32_1
67 years, male
374.9
490_1
67 years, female
367.2
89_1
63 years, male
363.5
139_1
64 years, female
362.6
353_1
82 years, female
357.2
119_1
70 years, female
354.3
311_1
78 years, male
350.4
320_1
89 years, female
347.6
452_1
88 years, female
347.4
491_1
89 years, female
346.8
109_1
81 years, female
344.3
43_1
64 years, female
337.3
351_1
91 years, male
318.8
314_1
67 years, male
296.5
506_1
65 years, male
285.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.