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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDF2L1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
78.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
77.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
76.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
70.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
61.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
55.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
52.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
48.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
43.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
41.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
41.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
40.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
40.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
38.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
38.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
37.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
37.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
37.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
35.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
35.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
33.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
31.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
31.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
30.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
30.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
29.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
27.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
26.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
26.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
25.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
25.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
25.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
24.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
24.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
24.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
24.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
23.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
23.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
22.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
22.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
22.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
21.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
21.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
21.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
20.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
20.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
20.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
19.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
19.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
17.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
17.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
17.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
16.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
16.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
15.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
15.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
15.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
15.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
14.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
14.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
13.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
11.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDF2L1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
159.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
132.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
111.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
80.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
74.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
74.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
72.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
71.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
69.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
68.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
68.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
67.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
66.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
65.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
64.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
64.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
63.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
60.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
59.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
58.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
57.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
56.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
56.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
55.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
55.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
54.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
53.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
53.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
53.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
52.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
52.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
52.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
51.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
51.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
50.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
50.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
49.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
49.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
49.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
49.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
48.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
48.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
48.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
48.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
48.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
47.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
47.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
47.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
46.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
46.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
46.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
45.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
45.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
45.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
45.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
45.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
44.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
44.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
44.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
44.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
44.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
44.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
43.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
43.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
43.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
43.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
43.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
43.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
43.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
42.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
42.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
42.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
42.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
42.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
41.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
41.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
41.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
41.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
41.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
40.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
40.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
40.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
40.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
39.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
39.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
39.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
39.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
39.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
39.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
38.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
38.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
38.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
38.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
37.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
37.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
37.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
37.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
37.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
36.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
36.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
36.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
36.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
36.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
35.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
35.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
35.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
35.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
35.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
35.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
34.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
34.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
34.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
34.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
34.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
33.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
33.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
33.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
33.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
33.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
33.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
33.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
33.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
33.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
33.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
33.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
33.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
33.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
33.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
33.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
32.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
32.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
32.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
32.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
32.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
32.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
32.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
32.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
32.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
32.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
32.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
31.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
31.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
31.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
31.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
31.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
31.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
31.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
31.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
31.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
31.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
31.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
30.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
30.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
30.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
30.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
30.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
30.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
30.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
30.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
30.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
29.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
29.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
29.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
29.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
29.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
29.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
29.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
29.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
29.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
29.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
29.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
29.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
29.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
29.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
29.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
28.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
28.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
28.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
28.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
28.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
28.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
28.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
28.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
28.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
28.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
28.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
28.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
28.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
28.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
28.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
27.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
27.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
27.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
27.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
27.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
27.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
27.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
27.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
27.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
27.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
27.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
27.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
27.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
26.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
26.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
26.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
26.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
26.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
26.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
26.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
26.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
26.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
26.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
26.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
26.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
26.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
26.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
26.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
25.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
25.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
25.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
25.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
25.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
25.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
25.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
25.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
25.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
25.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
25.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
25.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
25.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
25.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
25.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
25.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
25.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
24.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
24.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
24.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
24.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
24.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
24.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
24.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
24.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
24.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
23.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
23.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
23.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
23.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
23.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
23.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
23.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
23.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
23.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
23.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
23.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
23.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
23.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
23.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
23.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
23.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
23.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
23.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
23.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
23.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
23.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
22.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
22.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
22.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
22.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
22.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
22.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
22.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
22.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
22.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
22.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
22.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
22.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
22.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
22.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
22.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
22.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
22.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
22.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
22.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
22.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
22.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
22.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
22.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
22.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
22.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
22.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
21.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
21.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
21.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
21.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
21.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
21.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
21.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
21.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
21.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
21.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
21.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
21.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
21.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
21.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
21.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
21.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
21.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
21.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
21.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
21.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
21.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
21.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
21.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
21.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
21.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
21.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
20.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
20.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
20.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
20.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
20.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
20.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
20.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
20.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
20.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
20.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
20.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
20.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
20.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
20.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
20.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
20.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
20.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
20.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
20.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
20.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
20.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
20.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
20.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
20.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
20.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
20.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
20.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
20.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
20.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
19.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
19.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
19.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
19.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
19.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
19.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
19.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
19.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
19.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
19.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
19.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
19.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
19.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
19.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
19.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
19.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
19.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
19.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
19.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
19.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
19.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
18.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
18.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
18.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
18.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
18.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
18.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
18.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
18.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
18.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
18.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
18.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
18.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
18.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
18.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
18.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
17.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
17.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
17.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
17.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
17.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
17.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
17.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
17.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
17.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
17.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
17.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
17.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
17.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
17.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
17.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
17.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
17.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
17.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
17.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
17.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
17.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
17.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
17.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
17.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
16.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
16.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
16.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
16.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
16.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
16.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
16.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
16.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
16.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
16.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
16.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
16.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
16.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
16.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
16.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
16.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
16.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
16.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
16.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
15.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
15.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
15.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
15.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
15.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
15.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
15.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
15.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
15.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
15.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
15.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
15.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
15.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
15.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
15.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
15.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
15.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
14.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
14.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
14.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
14.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
14.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
14.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
14.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
14.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
14.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
14.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
14.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
14.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
14.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
14.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
14.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
14.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
14.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
14.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
14.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
14.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
14.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
14.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
14.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
13.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
13.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
13.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
13.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
13.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
13.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
13.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
13.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
13.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
13.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
12.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
12.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
12.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
12.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
12.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
12.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
12.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
11.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
11.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
11.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
11.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
11.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
11.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
11.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
10.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
10.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
10.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
9.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
9.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
8.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
8.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
8.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
7.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
7.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
7.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDF2L1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
108.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
101.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
77.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
74.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
72.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
67.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
65.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
57.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
52.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
51.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
49.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
48.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
48.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
46.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
40.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
39.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
39.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
39.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
38.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
38.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
38.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
37.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
37.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
37.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
36.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
35.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
35.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
34.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
34.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
34.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
34.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
33.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
33.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
33.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
32.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
32.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
31.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
31.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
30.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
30.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
29.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
29.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
28.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
28.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
28.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
28.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
27.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
27.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
27.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
27.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
27.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
27.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
26.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
26.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
26.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
26.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
26.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
25.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
25.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
25.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
25.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
24.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
24.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
24.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
23.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
23.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
23.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
23.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
23.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
23.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
22.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
22.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
21.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
21.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
21.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
19.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
18.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
18.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
18.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
18.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
17.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
16.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
15.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
13.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
13.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
12.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
9.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
8.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
8.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
8.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
7.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDF2L1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
124.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
79.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
77.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
75.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
75.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
73.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
73.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
72.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
71.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
69.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
69.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
68.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
68.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
67.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
65.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
65.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
61.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
61.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
60.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
60.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
60.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
59.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
58.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
58.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
58.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
58.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
55.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
55.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
55.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
54.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
54.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
54.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
53.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
53.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
53.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
52.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
52.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
52.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
52.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
51.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
50.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
50.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
50.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
49.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
49.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
49.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
48.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
48.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
47.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
47.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
47.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
47.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
47.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
47.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
47.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
47.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
46.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
46.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
45.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
45.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
45.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
45.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
45.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
44.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
44.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
44.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
43.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
43.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
42.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
42.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
42.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
42.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
42.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
42.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
42.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
42.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
42.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
42.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
41.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
41.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
41.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
41.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
41.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
41.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
41.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
41.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
41.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
41.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
41.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
40.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
40.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
40.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
40.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
40.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
39.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
39.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
39.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
38.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
38.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
38.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
38.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
38.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
37.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
37.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
37.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
37.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
37.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
37.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
37.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
37.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
37.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
37.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
36.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
36.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
36.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
36.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
36.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
36.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
36.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
36.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
36.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
36.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
35.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
35.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
35.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
34.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
34.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
34.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
34.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
34.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
34.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
33.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
33.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
33.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
33.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
33.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
33.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
33.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
33.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
33.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
33.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
33.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
32.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
32.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
32.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
32.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
32.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
32.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
32.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
32.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
32.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
31.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
31.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
31.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
31.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
31.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
31.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
31.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
31.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
31.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
31.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
31.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
31.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
30.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
30.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
30.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
29.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
29.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
29.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
29.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
29.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
29.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
29.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
29.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
28.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
28.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
28.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
28.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
28.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
28.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
27.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
27.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
27.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
27.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
27.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
27.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
27.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
27.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
27.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
27.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
27.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
26.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
26.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
26.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
26.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
26.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
26.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
26.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
26.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
26.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
26.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
25.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
25.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
25.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
24.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
24.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
24.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
24.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
24.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
24.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
24.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
23.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
23.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
23.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
23.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
22.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
22.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
22.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
22.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
22.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
21.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
21.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
21.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
21.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
20.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
20.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
20.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
20.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
20.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
19.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
19.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
19.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
19.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
19.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
19.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
18.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
18.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
18.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
18.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
18.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
18.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
18.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
18.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
17.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
17.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
17.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
17.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
16.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
16.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
15.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
15.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
14.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
14.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
14.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
13.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
13.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
12.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
12.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
12.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
12.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
12.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
12.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
11.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
11.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
11.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
9.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
9.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
9.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
8.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
8.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
8.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
8.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
8.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
8.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
2.1
CPT0001180009
Tumor
1.5
CPT0002350011
Tumor
1.4
CPT0012180003
Tumor
1.4
CPT0025110003
Tumor
0.9
CPT0076330003
Tumor
0.8
CPT0079270003
Tumor
0.7
CPT0069160003
Tumor
0.7
CPT0001340003
Tumor
0.6
CPT0007320003
Tumor
0.6
CPT0011410003
Tumor
0.6
CPT0086820003
Tumor
0.6
CPT0017410003
Tumor
0.5
CPT0078800003
Tumor
0.5
CPT0088690003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0075130003
Tumor
0.4
CPT0092160003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0001260009
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0065430003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0078530001
Normal
0.3
CPT0014470001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0001350001
Normal
0.2
CPT0063630003
Tumor
0.2
CPT0076350001
Normal
0.2
CPT0075170001
Normal
0.2
CPT0001270001
Normal
0.2
CPT0078990003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0088710001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0000890001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0088480003
Tumor
0.2
CPT0075570001
Normal
0.2
CPT0081600003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0079430001
Normal
0.2
CPT0025060001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0010170001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0089040001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0014350001
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0089480003
Normal
0.0
CPT0026420001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0092310003
Normal
0.0
CPT0000660001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0086950003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0006530001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0063330001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0007470001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0077110003
Tumor
-0.1
CPT0077140001
Normal
-0.1
CPT0014450004
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0017850003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0065810003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0085670003
Tumor
-0.2
CPT0077500001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0026410003
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0025580004
Tumor
-0.2
CPT0069010001
Normal
-0.2
CPT0006440003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0001230001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0066470004
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0088970003
Tumor
-0.3
CPT0019990003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0012570003
Normal
-0.3
CPT0063320003
Tumor
-0.3
CPT0002270011
Tumor
-0.3
CPT0065750003
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0015810003
Tumor
-0.3
CPT0079300001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0010160003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0078930003
Tumor
-0.3
CPT0069000003
Tumor
-0.3
CPT0088760003
Tumor
-0.3
CPT0078660003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0025170003
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0006900003
Tumor
-0.3
CPT0018250001
Normal
-0.4
CPT0065690003
Tumor
-0.4
CPT0079510001
Normal
-0.4
CPT0065930003
Tumor
-0.4
CPT0012370003
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0009080003
Normal
-0.4
CPT0024680001
Normal
-0.4
CPT0012900004
Tumor
-0.5
CPT0092790003
Tumor
-0.5
CPT0012640003
Normal
-0.5
CPT0077490003
Tumor
-0.5
CPT0012920003
Normal
-0.5
CPT0009020003
Normal
-0.5
CPT0012770003
Normal
-0.5
CPT0025290003
Tumor
-0.5
CPT0023690003
Tumor
-0.5
CPT0021240003
Tumor
-0.6
CPT0019130003
Tumor
-0.6
CPT0079230003
Tumor
-0.6
CPT0086030003
Tumor
-0.6
CPT0001500009
Tumor
-0.6
CPT0006630003
Tumor
-0.6
CPT0009000003
Tumor
-0.6
CPT0081880003
Tumor
-0.7
CPT0079180003
Tumor
-0.7
CPT0011240003
Tumor
-0.7
CPT0078510003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
