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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
128.8
nTPM
HPA Brain:
149.4
nTPM
GTEx:
128.8
nTPM
FANTOM5:
109.4
Scaled Tags Per Million
Pig:
67.9
nTPM
Mouse:
3.4
nTPM
Allen mouse:
0.5
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
149.4
Sample id
Sample description
nTPM
Amygdala nTPM: 98.3
2695
Female, age 67, right hemisphere
152.1
2814
Male, age 76, right hemisphere
118.6
2517
Female, age 94, left hemisphere
81.2
2514
Male, age 75, right hemisphere
77.5
1987
Female, age 91, left hemisphere
62.2
Basal amygdala nTPM: 101.2
2827
Female, age 67, right hemisphere
239.8
2685
Female, age 94, left hemisphere
99.3
2110
Male, age 80, left hemisphere
85.3
2609
Male, age 75, right hemisphere
84.4
1955
Male, age 76, both hemispheres
59.6
2243
Female, age 91, right hemisphere
38.4
Central amygdala nTPM: 119.6
2826
Female, age 94, left hemisphere
273.2
1905
Male, age 76, both hemispheres
95.3
2239
Male, age 80, left hemisphere
79.2
2515
Male, age 75, right hemisphere
77.6
2701
Female, age 91, right hemisphere
72.8
Corticomedial amygdala nTPM: 57.8
2535
Female, age 67, right hemisphere
107.1
2428
Male, age 75, right hemisphere
71.3
2829
Male, age 80, left hemisphere
51.3
2429
Female, age 94, left hemisphere
48.3
2240
Male, age 76, both hemispheres
43.1
2242
Female, age 91, right hemisphere
25.6
Lateral amygdala nTPM: 149.4
2830
Female, age 67, right hemisphere
358.2
2534
Female, age 94, left hemisphere
140.9
2516
Male, age 75, right hemisphere
129.0
2256
Male, age 80, left hemisphere
107.6
1883
Male, age 76, both hemispheres
96.5
2255
Female, age 91, right hemisphere
64.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
128.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 128.8
Samples: 152
Max nTPM: 436.3
Min nTPM: 28.2
Std nTPM: 82.5
Median nTPM: 102.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
436.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
422.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
375.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
365.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
328.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
322.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
318.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
300.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
286.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
281.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
269.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
268.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
264.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
261.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
249.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
235.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
234.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
230.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
229.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
229.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
222.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
219.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
215.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
213.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
210.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
208.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
207.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
200.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
196.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
195.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
191.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
190.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
175.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
168.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
167.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
166.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
163.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
162.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
160.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
160.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
157.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
157.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
156.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
155.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
154.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
152.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
152.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
150.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
145.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
145.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
145.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
142.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
138.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
136.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
136.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
135.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
134.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
133.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
131.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
129.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
128.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
124.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
121.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
120.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
119.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
119.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
113.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
112.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
112.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
112.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
111.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
110.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
108.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
108.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
106.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
103.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
101.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
101.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
101.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
101.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
100.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
98.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
97.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
97.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
94.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
93.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
92.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
92.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
91.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
89.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
87.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
85.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
85.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
84.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
80.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
80.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
79.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
78.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
77.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
76.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
76.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
76.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
74.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
73.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
73.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
71.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
70.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
70.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
70.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
70.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
69.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
66.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
66.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
65.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
64.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
64.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
63.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
63.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
62.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
61.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
60.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
60.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
58.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
58.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
58.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
56.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
55.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
55.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
55.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
54.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
53.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
53.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
53.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
53.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
53.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
52.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
52.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
50.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
50.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
50.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
48.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
48.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
47.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
46.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
46.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
46.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
44.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
39.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
37.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
36.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
35.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
28.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
3.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 3.4
Samples: 4
Max nTPM: 3.7
Min nTPM: 2.9
Sample A
Male
2.9
Sample B
Male
3.7
Sample C
Female
3.5
Sample D
Female
3.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.