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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZBTB1 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
28.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
22.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
17.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
15.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
15.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
15.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
14.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
14.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
14.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
14.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
13.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
13.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
12.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
11.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
11.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
11.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
11.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
11.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
11.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
10.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
10.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
10.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
10.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
10.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
10.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
9.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
9.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
9.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
9.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
9.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
9.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
9.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
8.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
8.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
8.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
8.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
8.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
8.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
8.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
8.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
8.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
8.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
8.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
8.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
8.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
8.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
8.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
8.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
8.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
8.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
8.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
7.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
7.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
7.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
7.8
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
7.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
7.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
7.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
7.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
7.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
7.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
7.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
7.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
7.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
7.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
7.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
7.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
7.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
7.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
7.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
7.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
7.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
7.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
7.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
7.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
6.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
6.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
6.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
6.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
6.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
6.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
6.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
6.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
6.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
6.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
6.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
6.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
6.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
6.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
6.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
6.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
6.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
6.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
6.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
6.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
6.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
6.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
6.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
6.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
6.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
6.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
6.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
6.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
6.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
5.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
5.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
5.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
5.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
5.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
5.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
5.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
5.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
5.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
5.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
5.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
5.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
5.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
5.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
5.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
5.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
5.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
5.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
5.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
5.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
5.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
5.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
5.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
5.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
5.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
5.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
5.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
5.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
5.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
5.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
5.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
5.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
5.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
5.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
5.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
5.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
5.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
5.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
5.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
5.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
5.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
5.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
5.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
5.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
5.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
5.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
5.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
5.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
5.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
4.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
4.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
4.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
4.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
4.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
4.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
4.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
4.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
4.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
4.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
4.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
4.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
4.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
4.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
4.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
4.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
4.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
4.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
4.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
4.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
4.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
4.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
4.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
4.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
4.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
4.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
4.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
4.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
4.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
4.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
4.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
4.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
4.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
4.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
4.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
4.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
4.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
4.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
4.2
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
4.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
4.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
4.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
4.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
4.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
4.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
4.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
4.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
4.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
4.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
4.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
3.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
3.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
3.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
3.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
3.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
3.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
3.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
3.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
3.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
3.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
3.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
3.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
3.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
3.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
3.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
3.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
3.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
3.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
3.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
3.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
3.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
3.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
3.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
3.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
3.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
3.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
3.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
3.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
3.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
3.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
3.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
3.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
3.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
3.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
3.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
3.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
3.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
3.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
3.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
3.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
3.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
3.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
2.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
2.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
2.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
2.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
2.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
2.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
2.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
2.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
2.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
2.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
2.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
2.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
2.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
2.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
2.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
2.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
2.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
2.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
2.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
2.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
2.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
2.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
2.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
2.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
2.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
2.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
2.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
2.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
2.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
1.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
1.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
1.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
1.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
0.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
0.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZBTB1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.6
Number of samples
231
Samples
Sample
Description
TPM
DO45305
0 years, male, NA, stage:4, alive, 300 days
24.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
21.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
19.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
19.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
18.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
18.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
18.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
17.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
17.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
17.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
16.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
16.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
16.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
15.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
15.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
15.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
15.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
15.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
15.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
14.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
14.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
14.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
14.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
14.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
13.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
13.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
13.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
13.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
12.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
12.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
12.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
12.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
12.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
12.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
12.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
12.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
11.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
11.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
11.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
11.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
11.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
11.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
11.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
11.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
11.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
11.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
11.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
10.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
10.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
10.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
10.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
10.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
10.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
10.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
10.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
10.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
10.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
10.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
10.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
10.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
10.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
10.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
10.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
10.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
10.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
10.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
10.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
10.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
9.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
9.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
9.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
9.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
9.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
9.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
9.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
9.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
9.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
9.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
9.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
9.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
9.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
9.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
9.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
9.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
9.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
9.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
9.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
9.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
9.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
9.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
9.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
9.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
9.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
9.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
8.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
8.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
8.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
8.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
8.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
8.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
8.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
8.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
8.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
8.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
8.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
8.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
8.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
8.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
8.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
8.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
8.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
8.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
8.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
8.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
8.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
8.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
8.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
7.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
7.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
7.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
7.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
7.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
7.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
7.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
7.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
7.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
7.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
7.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
7.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
7.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
7.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
7.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
7.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
7.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
7.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
7.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
7.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
7.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
7.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
7.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
7.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
7.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
7.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
7.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
7.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
7.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
7.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
7.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
6.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
6.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
6.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
6.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
6.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
6.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
6.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
6.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
6.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
6.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
6.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
6.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
6.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
6.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
6.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
6.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
6.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
6.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
6.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
6.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
6.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
6.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
6.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
6.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
6.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
6.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
6.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
6.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
6.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
5.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
5.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
5.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
5.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
5.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
5.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
5.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
5.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
5.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
5.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
5.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
5.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
5.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
5.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
5.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
5.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
5.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
5.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
5.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
5.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
5.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
5.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
4.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
4.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
4.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
4.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
4.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
4.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
4.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
4.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
4.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
3.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
3.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
3.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
3.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
3.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
3.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
3.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
2.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
2.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
2.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
2.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
2.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
2.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
1.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
1.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
1.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
217
Tumor
1.3
125
Tumor
1.1
113
Tumor
1.0
112
Tumor
1.0
937
Tumor
0.9
213
Tumor
0.9
535
Tumor
0.9
211
Tumor
0.9
126
Normal
0.9
375
Tumor
0.9
267
Tumor
0.8
221
Tumor
0.8
424
Normal
0.8
423
Tumor
0.8
737
Tumor
0.8
447
Tumor
0.8
414
Normal
0.8
426
Normal
0.8
428
Normal
0.8
1025
Tumor
0.7
283
Tumor
0.7
124
Normal
0.7
463
Tumor
0.7
195
Tumor
0.7
114
Normal
0.6
367
Tumor
0.6
413
Tumor
0.6
271
Tumor
0.6
111
Normal
0.6
497
Tumor
0.6
192
Normal
0.6
421
Tumor
0.6
422
Normal
0.6
191
Tumor
0.6
127
Tumor
0.5
161
Tumor
0.5
743
Tumor
0.5
445
Tumor
0.5
523
Tumor
0.5
1043
Tumor
0.5
385
Tumor
0.5
724
Normal
0.5
728
Normal
0.5
262
Normal
0.5
132
Normal
0.5
815
Tumor
0.5
471
Tumor
0.5
314
Normal
0.5
128
Normal
0.5
427
Tumor
0.4
444
Normal
0.4
536
Normal
0.4
492
Normal
0.4
955
Tumor
0.4
493
Tumor
0.4
448
Normal
0.4
123
Tumor
0.4
477
Tumor
0.4
272
Normal
0.4
332
Normal
0.4
491
Tumor
0.4
285
Tumor
0.4
861
Tumor
0.4
1044
Normal
0.4
865
Tumor
0.4
431
Tumor
0.4
527
Tumor
0.4
258
Normal
0.4
187
Tumor
0.4
185
Tumor
0.4
957
Tumor
0.3
494
Normal
0.3
455
Tumor
0.3
814
Normal
0.3
232
Normal
0.3
823
Tumor
0.3
546
Normal
0.3
222
Normal
0.3
533
Tumor
0.3
976
Normal
0.3
452
Normal
0.3
138
Normal
0.3
975
Tumor
0.3
214
Normal
0.3
538
Normal
0.3
135
Tumor
0.3
312
Normal
0.3
391
Tumor
0.3
383
Tumor
0.3
697
Tumor
0.3
545
Tumor
0.3
746
Normal
0.2
218
Normal
0.2
498
Normal
0.2
528
Normal
0.2
863
Tumor
0.2
534
Normal
0.2
432
Normal
0.2
231
Tumor
0.2
278
Normal
0.2
574
Normal
0.2
223
Tumor
0.2
136
Normal
0.2
451
Tumor
0.2
311
Tumor
0.2
434
Normal
0.2
715
Tumor
0.2
188
Normal
0.2
915
Tumor
0.2
553
Tumor
0.2
537
Tumor
0.2
145
Tumor
0.2
963
Tumor
0.2
261
Tumor
0.2
1031
Tumor
0.2
817
Tumor
0.2
473
Tumor
0.2
958
Normal
0.2
965
Tumor
0.2
756
Normal
0.2
1041
Tumor
0.2
966
Normal
0.2
558
Normal
0.2
1026
Normal
0.2
388
Normal
0.2
386
Normal
0.2
978
Normal
0.2
411
Tumor
0.1
257
Tumor
0.1
515
Tumor
0.1
298
Normal
0.1
1032
Normal
0.1
1042
Normal
0.1
142
Normal
0.1
914
Normal
0.1
968
Normal
0.1
873
Tumor
0.1
777
Tumor
0.1
525
Tumor
0.1
355
Tumor
0.1
268
Normal
0.1
146
Normal
0.1
1045
Tumor
0.1
564
Normal
0.1
465
Tumor
0.1
396
Normal
0.1
1021
Tumor
0.1
1014
Normal
0.1
392
Normal
0.1
331
Tumor
0.1
478
Normal
0.1
695
Tumor
0.1
387
Tumor
0.1
816
Normal
0.1
433
Tumor
0.1
926
Normal
0.1
877
Tumor
0.1
964
Normal
0.1
415
Tumor
0.1
917
Tumor
0.1
567
Tumor
0.1
572
Normal
0.1
721
Tumor
0.1
297
Tumor
0.1
147
Tumor
0.1
554
Normal
0.0
524
Normal
0.0
852
Normal
0.0
573
Tumor
0.0
563
Tumor
0.0
983
Tumor
0.0
148
Normal
0.0
313
Tumor
0.0
918
Normal
0.0
474
Normal
0.0
482
Normal
0.0
615
Tumor
0.0
488
Normal
0.0
727
Tumor
0.0
745
Tumor
0.0
224
Normal
0.0
912
Normal
0.0
967
Tumor
0.0
913
Tumor
0.0
483
Tumor
0.0
984
Normal
0.0
857
Tumor
0.0
171
Tumor
0.0
277
Tumor
0.0
518
Normal
0.0
196
Normal
0.0
416
Normal
0.0
286
Normal
0.0
394
Normal
0.0
461
Tumor
0.0
363
Tumor
0.0
1016
Normal
0.0
481
Tumor
0.0
513
Tumor
-0.1
981
Tumor
-0.1
131
Tumor
-0.1
514
Normal
-0.1
516
Normal
-0.1
467
Tumor
-0.1
916
Normal
-0.1
366
Normal
-0.1
851
Tumor
-0.1
464
Normal
-0.1
526
Normal
-0.1
628
Normal
-0.1
212
Normal
-0.1
738
Normal
-0.1
484
Normal
-0.1
786
Normal
-0.1
923
Tumor
-0.1
742
Normal
-0.1
982
Normal
-0.1
617
Tumor
-0.1
723
Tumor
-0.1
713
Tumor
-0.1
741
Tumor
-0.1
696
Normal
-0.1
1013
Tumor
-0.1
858
Normal
-0.1
443
Tumor
-0.1
977
Tumor
-0.1
1022
Normal
-0.1
868
Normal
-0.1
813
Tumor
-0.1
778
Normal
-0.1
395
Tumor
-0.2
884
Normal
-0.2
472
Normal
-0.2
425
Tumor
-0.2
785
Tumor
-0.2
921
Tumor
-0.2
227
Tumor
-0.2
186
Normal
-0.2
1015
Tumor
-0.2
456
Normal
-0.2
922
Normal
-0.2
867
Tumor
-0.2
446
Normal
-0.2
924
Normal
-0.2
881
Tumor
-0.2
228
Normal
-0.2
636
Normal
-0.2
364
Normal
-0.2
716
Normal
-0.2
686
Normal
-0.2
328
Normal
-0.2
412
Normal
-0.2
878
Normal
-0.2
874
Normal
-0.2
1046
Normal
-0.2
755
Tumor
-0.2
824
Normal
-0.2
568
Normal
-0.2
172
Normal
-0.2
864
Normal
-0.2
818
Normal
-0.2
435
Tumor
-0.3
141
Tumor
-0.3
284
Normal
-0.3
925
Tumor
-0.3
627
Tumor
-0.3
327
Tumor
-0.3
162
Normal
-0.3
698
Normal
-0.3
1028
Normal
-0.3
714
Normal
-0.3
362
Normal
-0.3
952
Normal
-0.3
393
Tumor
-0.3
365
Tumor
-0.3
466
Normal
-0.3
436
Normal
-0.3
468
Normal
-0.3
911
Tumor
-0.3
517
Tumor
-0.3
883
Tumor
-0.3
744
Normal
-0.3
685
Tumor
-0.3
882
Normal
-0.4
557
Tumor
-0.4
571
Tumor
-0.4
487
Tumor
-0.4
722
Normal
-0.4
635
Tumor
-0.4
641
Tumor
-0.4
137
Tumor
-0.4
356
Normal
-0.4
866
Normal
-0.4
1027
Tumor
-0.4
462
Normal
-0.5
862
Normal
-0.5
943
Tumor
-0.5
642
Normal
-0.5
951
Tumor
-0.5
368
Normal
-0.5
376
Normal
-0.5
618
Normal
-0.5
956
Normal
-0.5
616
Normal
-0.5
361
Tumor
-0.6
953
Tumor
-0.6
944
Normal
-0.7
384
Normal
-0.8
954
Normal
-1.0
938
Normal
-1.1
351
Tumor
N/A
352
Normal
N/A
353
Tumor
N/A
354
Normal
N/A
357
Tumor
N/A
358
Normal
N/A
647
Tumor
N/A
648
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
663
Tumor
N/A
664
Normal
N/A
665
Tumor
N/A
666
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
341
Tumor
N/A
342
Normal
N/A
343
Tumor
N/A
344
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
