HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:12.9 nTPM
HPA Brain:35.3 nTPM
GTEx:12.9 nTPM
FANTOM5:29.1 Scaled Tags Per Million
Pig:9.1 nTPM
Mouse:3.4 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050516
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 35.3
Sample id Sample description nTPM
Hippocampus
nTPM: 33.2
1911 Female, age 85, right hemisphere 39.4
2621 Female, age 67, right hemisphere 36.7
1855 Male, age 76, left hemisphere 33.6
2148 Female, age 91, left hemisphere 31.3
2529 Female, age 94, left hemisphere 29.4
1898 Male, age 80, left hemisphere 28.9
Dentate gyrus
nTPM: 32.5
2010 Male, age 76, both hemispheres 40.0
1927 Female, age 91, both hemispheres 32.9
2246 Female, age 85, both hemispheres 32.3
2530 Female, age 94, left hemisphere 31.9
2531 Female, age 67, both hemispheres 29.9
2528 Male, age 74, both hemispheres 28.0
Entorhinal gyrus
nTPM: 28.4
2686 Male, age 75, right hemisphere 30.8
1938 Female, age 85, left hemisphere 30.2
2613 Female, age 94, left hemisphere 30.0
2117 Female, age 91, right hemisphere 28.5
1787 Male, age 76, left hemisphere 28.1
2764 Male, age 80, right hemisphere 22.7
Hippocampus, CA1
nTPM: 35.3
2749 Male, age 80, left hemisphere 48.4
2045 Male, age 76, both hemispheres 37.3
2082 Female, age 91, right hemisphere 31.0
1873 Female, age 85, both hemispheres 30.4
2527 Male, age 74, both hemispheres 29.4
Hippocampus, CA2
nTPM: 32.9
1892 Male, age 76, both hemispheres 35.0
2249 Male, age 74, both hemispheres 34.9
1940 Female, age 85, left hemisphere 33.6
1963 Male, age 80, left hemisphere 32.4
2437 Female, age 94, left hemisphere 31.5
2113 Female, age 91, right hemisphere 30.3
Hippocampus, CA3
nTPM: 33.2
2137 Male, age 80, left hemisphere 41.0
1867 Male, age 76, both hemispheres 34.1
2436 Male, age 74, both hemispheres 33.8
1891 Female, age 85, both hemispheres 33.3
2620 Female, age 94, left hemisphere 29.8
2861 Female, age 67, both hemispheres 27.3
Parahippocampal cortex
nTPM: 28.9
2018 Male, age 76, both hemispheres 34.8
2693 Female, age 94, both hemispheres 32.7
2692 Male, age 74, both hemispheres 31.1
2622 Female, age 67, right hemisphere 30.8
2245 Female, age 91, both hemispheres 28.6
1933 Female, age 85, both hemispheres 27.6
1990 Female, age 91, right hemisphere 27.2
2532 Female, age 72, left hemisphere 27.1
1850 Male, age 80, both hemispheres 24.7
2250 Female, age 67, right hemisphere 24.5
Perirhinal gyrus
nTPM: 27.2
2521 Female, age 94, right hemisphere 31.4
1841 Female, age 85, right hemisphere 28.6
1794 Male, age 80, right hemisphere 26.1
2848 Male, age 76, right hemisphere 25.6
1847 Female, age 91, left hemisphere 24.0
Subiculum
nTPM: 32.2
2042 Male, age 76, both hemispheres 38.5
1901 Male, age 80, both hemispheres 34.8
2729 Female, age 91, right hemisphere 33.0
2438 Female, age 94, left hemisphere 31.4
1977 Female, age 85, both hemispheres 28.1
2619 Male, age 74, both hemispheres 27.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 12.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.9
Samples: 197

Max nTPM: 28.1
Min nTPM: 7.2
Std nTPM: 3.4
Median nTPM: 12.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 28.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 24.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 23.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 23.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 22.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 22.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 20.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 19.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 19.1
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 19.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 18.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 29.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.1
FF:10153-102I9 76 years, female 41.7
FF:10169-103B7 60 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 9.1
Pig sample Sample description nTPM
Subiculum
nTPM: 7.9
Samples: 4

Max nTPM: 9.1
Min nTPM: 6.9
Sample A Female 9.1
Sample B Female 7.3
Sample C Male 6.9
Sample D Male 8.2
Dorsal hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 9.6
Min nTPM: 8.5
Sample A Female 9.6
Sample B Female 8.8
Sample C Male 9.6
Sample D Male 8.5
Entorhinal cortex
nTPM: 9.1
Samples: 4

Max nTPM: 9.9
Min nTPM: 8.1
Sample A Female 8.7
Sample B Female 9.9
Sample C Male 9.7
Sample D Male 8.1
Ventral hippocampus
nTPM: 7.7
Samples: 4

Max nTPM: 8.9
Min nTPM: 5.8
Sample A Female 7.8
Sample B Female 8.3
Sample C Male 5.8
Sample D Male 8.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 3.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.4
Samples: 4

Max nTPM: 2.6
Min nTPM: 2.0
Sample A Male 2.6
Sample B Male 2.6
Sample C Female 2.3
Sample D Female 2.0
Hippocampal formation
nTPM: 3.5
Samples: 4

Max nTPM: 3.9
Min nTPM: 2.9
Sample A Male 3.3
Sample B Male 3.7
Sample C Female 3.9
Sample D Female 2.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
74990493 Antisense, RP_060410_01_B03, Mouse strain C57BL/6J (56 days, male) 0.6

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