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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
22.7
nTPM
HPA Brain:
173.1
nTPM
GTEx:
22.7
nTPM
FANTOM5:
526.7
Scaled Tags Per Million
Pig:
83.2
nTPM
Mouse:
0.1
nTPM
Allen mouse:
0.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
173.1
Sample id
Sample description
nTPM
Amygdala nTPM: 173.1
2695
Female, age 67, right hemisphere
317.1
2514
Male, age 75, right hemisphere
163.7
1987
Female, age 91, left hemisphere
154.7
2814
Male, age 76, right hemisphere
132.3
2517
Female, age 94, left hemisphere
97.6
Basal amygdala nTPM: 113.5
1955
Male, age 76, both hemispheres
172.9
2110
Male, age 80, left hemisphere
112.7
2243
Female, age 91, right hemisphere
109.2
2609
Male, age 75, right hemisphere
105.4
2827
Female, age 67, right hemisphere
94.1
2685
Female, age 94, left hemisphere
86.8
Central amygdala nTPM: 144.1
2701
Female, age 91, right hemisphere
221.2
2515
Male, age 75, right hemisphere
163.4
1905
Male, age 76, both hemispheres
120.2
2239
Male, age 80, left hemisphere
110.7
2826
Female, age 94, left hemisphere
104.7
Corticomedial amygdala nTPM: 130.3
2240
Male, age 76, both hemispheres
187.2
2428
Male, age 75, right hemisphere
143.3
2242
Female, age 91, right hemisphere
134.1
2535
Female, age 67, right hemisphere
112.5
2829
Male, age 80, left hemisphere
105.6
2429
Female, age 94, left hemisphere
99.3
Lateral amygdala nTPM: 121.7
2256
Male, age 80, left hemisphere
184.9
2255
Female, age 91, right hemisphere
156.7
1883
Male, age 76, both hemispheres
125.5
2830
Female, age 67, right hemisphere
99.4
2534
Female, age 94, left hemisphere
87.9
2516
Male, age 75, right hemisphere
75.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
22.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 22.7
Samples: 152
Max nTPM: 134.9
Min nTPM: 1.0
Std nTPM: 23.2
Median nTPM: 14.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
134.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
114.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
113.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
97.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
81.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
72.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
67.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
67.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
66.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
62.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
62.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
60.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
58.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
55.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
53.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
52.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
49.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
48.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
47.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
46.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
45.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
43.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
42.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
42.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
40.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
39.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
39.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
39.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
37.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
37.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
37.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
35.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
34.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
34.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
34.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
34.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
34.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
31.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
30.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
30.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
28.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
28.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
27.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
25.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
25.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
25.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
25.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
23.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
22.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
21.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
21.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
20.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
20.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
20.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
20.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
20.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
20.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
20.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
19.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
19.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
19.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
19.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
18.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
17.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
17.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
16.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
16.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
16.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
16.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
15.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
15.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
15.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
15.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
15.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
14.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
14.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
14.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
13.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
13.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
13.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
13.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
12.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
12.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
12.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
12.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
12.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
12.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
12.3
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
12.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
11.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
11.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
11.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
11.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
10.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
10.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
10.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
9.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
9.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
9.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
9.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
9.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
9.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
9.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
9.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
8.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
8.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
8.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
8.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
8.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
7.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
7.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
7.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
7.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
7.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
7.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
7.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
7.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
6.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
6.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
6.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
6.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
6.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
6.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
6.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
6.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
6.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
5.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
5.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
5.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
5.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
5.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
4.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
4.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
4.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
4.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
4.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
4.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
3.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
2.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
2.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
2.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
2.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
2.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
2.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
2.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
2.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
2.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
1.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
1.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
1.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
1.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
1.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
0.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 0.1
Samples: 4
Max nTPM: 0.1
Min nTPM: 0.0
Sample A
Male
0.1
Sample B
Male
0.0
Sample C
Female
0.0
Sample D
Female
0.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.